Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq204 127 2e-24 >seq204 Length=29198 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 157876 AGTCTTATAGGTCAAGGATACTATGGAACCATCACACCCCCAGTCATACAGCGAAACGTT 157935 || ||||| || ||||| ||||||| | || ||| |||||||| ||||| |||||| Sbjct 24453 AGCCTTATCGGACAAGGTTACTATGATGCTATTTTACCACCAGTCATCCAGCGTAACGTT 24512 Query 157936 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 157995 || || ||||| | |||||||| ||||||| || |||||||||||||| || || || Sbjct 24513 CTCGAAAATCCCAACTGGTACACTCCTTACACGCCGTATCAAGCTGAGATTTCCCAAGGC 24572 Query 157996 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGA-ACTCACAGGACTACCGAT 158054 || | || | || || ||||||||||| | || || || | | || || | ||||| Sbjct 24573 CGACTTGAGTCGTTGTTGAATTACCAAACTATGATTACCGACATTACCAAGA-TGCCGAT 24631 Query 158055 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || |||||||| | | ||| | ||||| || ||| ||||| ||| Sbjct 24632 TGCTAACGCATCGTTGCTTGATCAGGCAACAGCTGCAAGCGAAGCTATG 24680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588034616956160