Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq781 96.9 2e-15 >seq781 Length=13536 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || | || |||||||| || |||||||| Sbjct 13280 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTCCCGGCAAAG 13221 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || ||| Sbjct 13220 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 13161 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || ||||| || || | | || || || || || || |||||||| Sbjct 13160 TCGATCGTGTCCGACGCCTCGACCTCAAGCGCAATCGTCTTCCCGGTCAGCGTCTTCACG 13101 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 13100 AAGATCTGCAT 13090 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| ||| | || | || |||||||| || |||||||| Sbjct 13052 TCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCCAGCTGCTTCCCGGCAAAG 12993 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || ||| Sbjct 12992 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTC 12933 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC---CCGTGAGAGTCTTC 34967 | |||| || ||||| || || | | | || |||| | ||||| ||||| Sbjct 12932 TCGATCGTGTCCGACGCCTCGACCTCAAGCGCAAGCGTCTTTCTGTCTGTGAGCGTCTTT 12873 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 12872 ACAAAGATCTGCAT 12859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324624674199168