Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq204 127 2e-24 >seq204 Length=29198 Score = 127 bits (140), Expect = 2e-24 Identities = 160/217 (74%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 139871 TGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCCTG-TAAGTTCTG 139929 ||| || ||||| | ||| | | |||||||| || || || | || || ||| || | Sbjct 24668 TGCAGCTGTTGCCTGATCAAGCAACGATGCGTTAGCAATCGGCA-TCTTGGTAATGTCGG 24610 Query 139930 TGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATATCTCAGCTTGAT 139989 | || | ||||||||||| || || | || | || || || || ||||||||||||| Sbjct 24609 TAATCATAGTTTGGTAATTCAACAACGACTCAAGTCGGCCTTGGGAAATCTCAGCTTGAT 24550 Query 139990 AGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAACGTTTCGCTGTATGACTGGGG 140049 | || ||||||| |||||||| | ||||| || |||||||| ||||| |||||||| | Sbjct 24549 ACGGCGTGTAAGGAGTGTACCAGTTGGGATTTTCGAGAACGTTACGCTGGATGACTGGTG 24490 Query 140050 GTGTAATGGTTCCATAGTATCCTTGACCTATAAGACT 140086 || ||| | ||||||| ||||| || ||||| || Sbjct 24489 GTAAAATAGCATCATAGTAACCTTGTCCGATAAGGCT 24453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578982072245120