Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25]
2,256 sequences; 39,864,394 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq781 116 3e-21
>seq781
Length=13536
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||||| ||||| || || ||| |||| || || || || |
Sbjct 13090 ATGCAGATCTTCGTGAAGACGCTGACCGGGAAGACGATTGCGCTTGAGGTCGAGGCGTCG 13149
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 13150 GACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 13209
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||||||||||||||| ||||||||||| | | | | || || |||
Sbjct 13210 CAGCGCCTGATCTTTGCCGGGAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACAAC 13269
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| ||||| || ||| | ||| |||| ||||||| ||
Sbjct 13270 ATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTGCGCGGTGG 13316
Score = 107 bits (118), Expect = 2e-18
Identities = 164/233 (70%), Gaps = 3/233 (1%)
Strand=Plus/Plus
Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCG---GTAAAACTATTACGCTCGAAGTAGAAG 24758
|||||||||||||| | || ||||| || | | || || || |||| || || || |
Sbjct 12857 CGATGCAGATCTTTGTAAAGACGCTCACAGACAGAAAGACGCTTGCGCTTGAGGTCGAGG 12916
Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818
| | ||||| | || | || || |||||||| ||||| || || || || || |
Sbjct 12917 CGTCGGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGG 12976
Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATT 24878
| || || || |||||||||||||||| ||||||||||| | | | | || |
Sbjct 12977 ACCAGCAGCGCCTGATCTTTGCCGGGAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACT 13036
Query 24879 ATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
| ||||| || ||||| ||||| || ||| | ||| |||| ||||||| |||
Sbjct 13037 ACAACATCCAGAAGGAGTCGACGCTGCACCTCGTGCTGCGCCTGCGCGGCGGC 13089
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449884912887680
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |