Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq2277 100 6e-16 seq307 91.5 3e-13 >seq2277 Length=2457 Score = 100 bits (110), Expect = 6e-16 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 230416 GAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGA 230475 |||||||| || ||||| | || || || || ||||||||||| || || ||| Sbjct 738 GAGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCG 679 Query 230476 CAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTAC 230535 ||||||||||| ||||| || ||||| | |||| | || || ||||| ||| Sbjct 678 CAGTACATCGAGTTCGTGGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGAAGCACTAC 619 Query 230536 AACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTC 230595 || | | | || || | || |||||| | || ||||| || || ||||| |||||| Sbjct 618 CACGTGACGCAGCCGTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 559 Query 230596 TTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGA 230638 ||||| ||| ||| | || || |||| | | |||||||||| Sbjct 558 TTCGAGAAGAAGGTCGGCGAGTACCAGAAGGCGGGTGTGATGA 516 >seq307 Length=25638 Score = 91.5 bits (100), Expect = 3e-13 Identities = 122/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 281731 GGTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCG 281790 || ||||||| |||||||| || | || |||||||| ||||| |||| ||| || Sbjct 2986 GGCTCAGTTTGGTGAAGATGTAACGTGGGGCTGCGTGGTCGTTACCGAGCTGCTGCCGCG 2927 Query 281791 ACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAG 281850 | || || ||||||||||||| | | ||| ||||| |||| || | | | ||| | Sbjct 2926 AGCCGAATTGACCCTCCGGCACGAGCAGGTTGATGTTGTTGCCACCCGTGAAGTTCTGCG 2867 Query 281851 CCAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCG 281900 ||| || || || ||| |||| ||||| |||| || ||||| ||||| Sbjct 2866 CCATCTTCACAATCGTCTCCTGCAGCGACGCCTCGCCATGGTGGAAGGCG 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057753536029370