Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1483 120 2e-22 seq424 120 2e-22 seq2938 95.1 1e-14 >seq1483 Length=4907 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| ||||||||||| || ||| | || ||| Sbjct 4311 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCC 4252 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 4251 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 4192 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||| ||||| | | ||||||||| Sbjct 4191 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCGACCTCGAGCGCGATCGTCTTG 4132 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341 || ||||| |||||||| ||||| |||||| ||| Sbjct 4131 CCGGTCAGCGTCTTCACGAAGATCTGCATGGTGC 4098 >seq424 Length=20549 Score = 120 bits (132), Expect = 2e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| ||||||||||| || ||| | || ||| Sbjct 20275 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCCTCCTCC 20334 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| ||||| || || | |||||||||||| Sbjct 20335 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 20394 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| | |||| ||||| | | ||||||||| Sbjct 20395 ATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCGACCTCGAGCGCGATCGTCTTG 20454 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGC 45341 || ||||| |||||||| ||||| |||||| ||| Sbjct 20455 CCGGTCAGCGTCTTCACGAAGATCTGCATGGTGC 20488 >seq2938 Length=1608 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192 ||||||||| ||||||||| ||||||||||| || ||| | || ||||| || Sbjct 1416 GTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTG 1475 Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252 || ||||| || |||| ||||| ||||| || || | |||||||||||| || || Sbjct 1476 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTT 1535 Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312 ||| || | | | |||| | |||| ||||| | | ||||||||||| || Sbjct 1536 CGCCTTCACGTTCTCGATCGTGTCGCTGGCCTCGACCTCGAGCGCGATCGTCTTGCCGGT 1595 Query 45313 CAGAGTCTTCAC 45324 ||| |||||||| Sbjct 1596 CAGCGTCTTCAC 1607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395050166924179