Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq87 149 5e-31 >seq87 Length=48621 Score = 149 bits (164), Expect = 5e-31 Identities = 280/408 (69%), Gaps = 8/408 (2%) Strand=Plus/Minus Query 20931 TCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTC 20990 || ||||| ||| |||| ||||| || ||||| | ||||||||| | || || || | Sbjct 37894 TCCACGTGATTGCTGTAGACGTGCGCATCACCGAGGGTGTGCACCAGCTCACCTGGACGC 37835 Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 || ||||| | | |||||||| ||||| || | ||| |||||||| ||||| Sbjct 37834 AGCCCCGTCGCCTTTGCGATCAGGATGGTCAGCAGCGAGTACGACGCGATGTTGAACGGC 37775 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCC-----CCCC 21105 |||||||| |||||||| ||||| |||||||||| ||||||||||||| | | Sbjct 37774 ACCCCGAGACCCATGTCACAGGACCGCTGGTACAGCATGCAGGACAGCTCCTTCGTCTGC 37715 Query 21106 GAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCC 21164 | | ||||| ||||| | | | ||| || || ||||| |||||| | | | | | Sbjct 37714 GTGTTGACGTAGAACTGGCCGAGCAGGTGGCAGGGCGGGAGTGCCATCTG-GTGCAGCGC 37656 Query 21165 GC-GGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATC 21223 || ||||||||||| | | | || ||||||| || | | || | || Sbjct 37655 GCACGGGTTCCACGCCGTGAAGAGCAGCCGGCGATCGTTCGGGTTCGTCTTGAGGGTCTC 37596 Query 21224 CACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTA 21283 || | | | |||||||||||| | || |||||||| |||||| ||| | || Sbjct 37595 GACAATCTGCTTGATCTGGTCCACCCCTTCTCCGTCGTAGTTCGCGTCGAAGCCCTTATA 37536 Query 21284 CTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 ||| ||||| || || | ||||||||| ||||| || || || || || Sbjct 37535 CTCTGCCCCGAAGTGACGCCACTGGAAGCCGTAGACGGGGCCGAGGTC 37488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427748894909520