Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq133 100 2e-16 >seq133 Length=39883 Score = 100 bits (110), Expect = 2e-16 Identities = 110/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || ||||||||||| |||| | ||||| | |||||||||| |||||| || | Sbjct 4517 ATCGGCGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACCAACGGCATTCAGTTCCG 4575 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 |||| ||||||||| |||| ||||||||| || |||||||| |||||||||| || Sbjct 4576 CCAGGAGGACATGCCCTTCAACCGCGACGGCGTCGTGCCGGACCTCATCATCAACCCCCA 4635 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | ||||| ||||||||||| Sbjct 4636 CGCCATTCCCTCCCGCATGACGGT 4659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356211028037197