Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq523 82.4 8e-11 >seq523 Length=17530 Score = 82.4 bits (90), Expect = 8e-11 Identities = 221/333 (66%), Gaps = 9/333 (3%) Strand=Plus/Plus Query 157481 ATGTCGCAATGCCACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTT---GCCACCT 157537 |||||| ||||||||| || | ||| | || ||| || || ||||| ||| || Sbjct 1785 ATGTCGGCATGCCACGGCTCCAGGTAGATGGCGAAGGCACCCTTGCGCTTACCGCCGCCC 1844 Query 157538 TGATCCACGTGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCG 157597 || ||||||| ||| | | || || || || |||||||| || | || ||| ||| Sbjct 1845 TGGTCCACGTAACGGGCAGTGTTGTTGAACACACGCAGCATCGGCACCAAGCCGTTGGAC 1904 Query 157598 GTGCCGTTCGTAGATTTTATTTTGCTGTTGCGGCCGCGTACGCTGTTCACGTTCAATCCA 157657 || |||||||| || | |||| | | ||| | | ||| |||| || || Sbjct 1905 GTCCCGTTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGGACGTGCAGGCCG 1964 Query 157658 ATACCGCC-GCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCG 157716 || ||||| |||| || ||| | |||||| || || | |||| ||||||||| Sbjct 1965 ATGCCGCCCGCCGCCTTGCT-GATGACGGCGCACTCCTTCAGCGTGTCGTAGATGCCGTC 2023 Query 157717 AATGCTATCG--CTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTG 157774 ||||| || |||| | | ||| | || || || ||||||||||| || | || Sbjct 2024 GATGCTGTCTTCCTTTGAAGCGACAA--GGAAGCACGAGCTCATCTGCGGCTTCGGCGTG 2081 Query 157775 CCGGCAGCGAACATGGTTGGGCTTGCGTGCGTG 157807 ||||| ||| | ||| ||| | ||||| ||| Sbjct 2082 CCGGCGTTGAAGAGGGTCGGGGTGGCGTGGGTG 2114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506981450401680