Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq133 105 5e-18 >seq133 Length=39883 Score = 105 bits (116), Expect = 5e-18 Identities = 134/180 (74%), Gaps = 6/180 (3%) Strand=Plus/Minus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 || ||||| | |||||||| |||||||||||||||||||||||| ||||| || ||||| Sbjct 4659 ACCGTCATGCGGGAGGGAATGGCGTGGGGGTTGATGATGAGGTCCGGCACGACGCCGTCG 4600 Query 71476 TTGTCGAAGGGCATGTCCTCCTGGGTCAGGAC--AGCTCCGCATGTCCCCTTTTGCGCCG 71533 || ||||||||||||||||||| | | || | ||| || ||||| ||| ||| Sbjct 4599 CGGTTGAAGGGCATGTCCTCCTGG--CGGAACTGAATGCCGTTGGTGCCCTTCTGC-CCG 4543 Query 71534 TGAATGACGCA-AACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTTG 71592 || | ||| ||||||||||| || | ||| | || ||| | | | |||||||| Sbjct 4542 TGCCGGCTGCAGAACTTGTCGCCGATGTTGGGGATCTTGATGGTGCGGATCTTCACCTTG 4483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338743334909496