Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq4678 82.4 7e-11 seq1723 82.4 7e-11 seq1521 82.4 7e-11 seq1467 82.4 7e-11 seq566 82.4 7e-11 >seq4678 Length=659 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 538 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 479 >seq1723 Length=3910 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 94 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 153 >seq1521 Length=4688 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 235 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 176 >seq1467 Length=5004 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 4243 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 4184 >seq566 Length=16467 Score = 82.4 bits (90), Expect = 7e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 115617 GGTGAGGATCGAACTCACAACCTTGGCATTATAAGTACCACGCGCTGCCGATTGCGCTAC 115676 |||||||||||||||||| ||||||| ||||| || |||||||||||||| |||||||| Sbjct 8964 GGTGAGGATCGAACTCACGACCTTGGGATTATGAGACCCACGCGCTGCCGACTGCGCTAC 9023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262066675640