Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq523 311 8e-80 seq2277 183 3e-41 seq1483 132 5e-26 seq424 132 5e-26 seq2938 111 1e-19 >seq523 Length=17530 Score = 311 bits (344), Expect = 8e-80 Identities = 1092/1674 (65%), Gaps = 51/1674 (3%) Strand=Plus/Plus Query 144736 GGCCGCTGGCTTGGTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTA 144795 ||| || | ||| ||||||| || |||| ||||| ||||| ||||| ||| ||||| Sbjct 464 GGCAGCCGCCTTCGTGCGCAGGTAATACACACCCGTCTTGAGACCCGACTCCCAGGTGTA 523 Query 144796 GTCGTGTATCGACGTCATCAGAGCGTACGTGGG-CTCCGCCACAAACAAATTTAGCGATT 144854 | | | |||||||| ||| || | | ||||| ||| || | || | || ||||| | Sbjct 524 GAAGAGCATCGACGTGATCTGACCAGAGGTGGGGCTCTGC-AGGAAGAGGTTCAGCGACT 582 Query 144855 GGCTTTGATCAATGAAAGCGTTGCGGTCGGCGGCCATCTCAATCATACGTTTGCATTTC- 144913 || || || ||| | | ||||||| |||||| || |||| | |||| | | Sbjct 583 GGGACTGGTCGATGTACTGGCCGCGGTCGCGGGCCATGTCGATCA---GCTTGCGCTGCG 639 Query 144914 --ATTTCCCAAGCGGTCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCT 144971 || ||||| |||| ||| | || | || |||||| |||| ||| |||| | Sbjct 640 GGATCTCCCACACGGTGCGGTAGAGCTCCTTGAGGTCGTCCGGGATGCTGTCGATCGTCA 699 Query 144972 GAATCGACCCCTTGTGCGCAAATATGGCGTTCCGCATT-TCGGACGTGT-ACAGTTTTAA 145029 | | || || |||| | | || | |||||||| || ||| |||| Sbjct 700 GGACGGAGCCGTTGTAGGAGATGATCTCATTCCGCATCGTCT--CGTTCCACAGCCCGCG 757 Query 145030 CTTGATCAAGTCGTCAATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACG 145089 |||||| | ||| | | ||||| || || ||| | |||||||| || |||||| Sbjct 758 CTTGATGAGGTCCATCACGAGGTACTTGTTCACCACCGGGAACTCGCCACTCAGCACACG 817 Query 145090 ACGCAAATACACGTTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGC 145149 || | || | ||| || ||||| || || || ||||||| ||||| ||||| || | Sbjct 818 GCGGACGTAGATGTTCGAGGTGAATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGA 877 Query 145150 GGTCGTTGCGGTGGGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGAT 145209 |||| ||||||||||| || | || | || |||||||||||| || | Sbjct 878 CGTCGACGCGGTGGGCATCGGGGCGAGCAGGAGGGAGTTGCGCAGGCCGACCTGAACCAC 937 Query 145210 GTCTTCCTTTAGCGTACCCCAATCCCATAG--CGAAGTC-GGCCTCACGTCC---CACAT 145263 | | ||| || | |||| ||||| | || || || | | || | ||||| Sbjct 938 CTTCTGCTTCAGGCTGTCCCAGTCCCAGCGACCGCTGTTAGGACGCGGGTTCTTCCACAT 997 Query 145264 GTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCA 145323 ||| ||||||| ||||||| ||| || || ||||| | |||| |||| ||| Sbjct 998 GTCAAACTGCAAGATGCCCTGGCTCGCCGGACTGCCCTTGAAGGTCTCGTAAGGGCCTTC 1057 Query 145324 AGTTTTGGCGAGCTCGCAACT-CGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTT 145382 || || | ||| || | |||||||| ||| | || || || |||||| || | Sbjct 1058 CTCCTTCGCCAACTC-CATCGACGCCTCCACCGCGGCAAAGTAGATCGTCTCGAAGATCT 1116 Query 145383 GCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCAT 145442 | || | | || ||| || | || || | |||| ||||| || | || |||| Sbjct 1117 CCGCATTCACCCGCTGCGCCTCGGCACTGACGAAGGGCAGACGCAGTAGAATGAAGGCAT 1176 Query 145443 CGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCG 145502 | || || ||||| | || | ||| | || || | ||||||||| | ||||| Sbjct 1177 CCGCCAGGCCCTGCACACCGAGGCCCACCGGGCGGTTGCGCATGTTGCTGCGGCGCGCCG 1236 Query 145503 ACTCGATAGGATATCGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTG 145562 ||| | || || || ||||| || | |||| ||| || | ||| | Sbjct 1237 TCTCCACCGGGTAGTAGTTGCGGTCAATGACCCGGTTCAGGTTGCGGGTGATCTGCTTCG 1296 Query 145563 TAA---TGTGCCGCAACTTTTCAAAGTCAAAC-CGAGCCTCGTCAACGACCACACAGCTA 145618 | | ||| | ||| || | | || | | || || || || || ||| ||| Sbjct 1297 TGACGCTGTACAGCAGCTGGTGA---TCCACCTCGCGCTTC-TCCTCGTTCACGAAGCGC 1352 Query 145619 TTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTAC 145677 | |||||| || || | || || || || |||||||| |||| || |||| | || Sbjct 1353 GGCAGGGCGATGGAGGCGAGGTTGCACACGGCGGTCTCCTCCGGCGACG-TGTACTCGAC 1411 Query 145678 GATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCT 145737 ||| || | ||||| || || ||||| || || || || | ||| || || || Sbjct 1412 GATTTCCGTGCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCT 1471 Query 145738 GTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT 145797 |||||||||||||||||| || ||| |||| |||| ||||| | ||||| ||| | ||| Sbjct 1472 GTTGCACGCGTCCTTGTACAGAATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGGAT 1531 Query 145798 --AAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTAT 145855 |||| || |||||||| | | | |||| | |||||||||| | ||||| Sbjct 1532 GGCAAAC--CACACCTCCTGCGCCTGGATCGTCTGCACGCCGCGGCCCTCTGCCTCGTAC 1589 Query 145856 TTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTG 145915 ||| ||| || ||| ||| | |||||||| || ||| || || ||| | | Sbjct 1590 TTCTCGTACAGGCGCTCGAACTCCTCGCCGTAGCAGTCACTCAGCCCCGGGCACGCGCTC 1649 Query 145916 GGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACC 145975 || |||||||| ||| || | | || || |||| ||| |||| || || | | Sbjct 1650 GGGTCCATCAGCGTCCACTTCCCCTCGCTCTTCACTCGCTTCATGAACAGGTCCGGGATC 1709 Query 145976 CACAGCGCGTACATCAAGT--CGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCA 146033 ||||||||||| | | || ||||||| || || || || |||| ||||||| Sbjct 1710 CACAGCGCGTAGAAGAGGTCACGCGCGCGCTG--GTCGTCCTTGCCGGTGTTGCGCTTCA 1767 Query 146034 AATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTT 146093 || | | ||||||| || |||||||| || | |||| ||||| ||| || | Sbjct 1768 GCAGCAGAAAGCCGAAGATGTCGGCATGCCACGGCTCCAGGTAGATGGCGAAGGCACCCT 1827 Query 146094 TTCGTTT---GCCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGG 146150 | || || ||| ||||||||||||| ||| | ||||||| || || |||| ||| | Sbjct 1828 TGCGCTTACCGCCGCCCTGGTCCACGTAACGGGCAGTGTTGTTGAACACACGCAGCATCG 1887 Query 146151 GCTCGACGCCGCTGGCTACG--CCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCAC 146208 || | | |||| ||| ||| |||||||| | || | ||||| |||||| | Sbjct 1888 GCACCAAGCCGTTGG--ACGTCCCGTTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGGAT 1945 Query 146209 GCAATGAACATTCACGCCGAGACCG-CCGCCGTACTTGGATATAGCGGCGCAGTCGCCGA 146267 | || || | || ||||| ||| |||||| |||| || ||||||| || | Sbjct 1946 GTTGTGGACGTGCAGGCCGATGCCGCCCGCCG-CCTTGCTGATGACGGCGCACTCCTTCA 2004 Query 146268 GCGTCTCGTAGATGCCGTCAATGCTATC--GCTTCGAATGCCGAGCAGAAAGCACGAGCA 146325 |||| |||||||||||||| ||||| || ||| ||| ||| || |||||||||| Sbjct 2005 GCGTGTCGTAGATGCCGTCGATGCTGTCTTCCTTTGAA--GCGACAAGGAAGCACGAGCT 2062 Query 146326 CATCTGCGCCATCGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAA 146379 |||||||| | ||||||| || || ||| | |||||| | ||||| || || Sbjct 2063 CATCTGCGGCTTCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGGGTGAA 2116 >seq2277 Length=2457 Score = 183 bits (202), Expect = 3e-41 Identities = 357/516 (69%), Gaps = 11/516 (2%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | | ||||| | || |||||| || ||||||| ||| || ||| Sbjct 1044 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGGAGCGGC---GCG 988 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCA-G 46202 | ||| ||||| || | | || || ||||||||| |||| || || || | Sbjct 987 AGCTTCCAGGAGCGGCTGATCGGGTTCGCCGCGGTGGAGGGCATCTTCTTCTCCGGGTCG 928 Query 46203 TTTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCA 46261 || ||| || | || | | || || | |||| | ||||| || |||||||| |||| Sbjct 927 TTCTGC-GCGCTGTTCTGGCTGAAGAAGCGCGGGC-TGATGCCGGGGCTGACGTTCAGCA 870 Query 46262 ACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACA 46321 |||||||||| |||||||||||||||||||| |||||||| ||||| || || ||| Sbjct 869 ACGAGCTGATCTCGCGCGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACG 810 Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGG 46381 | | | | | ||||||| ||| ||| ||||||| || || ||| |||||| Sbjct 809 CGCACATCAAGCACAAGCTGCCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGA 750 Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCC-CTGCTGGGCATGAACGCA 46440 ||| ||| ||||| | | ||| ||||| | ||| ||| | ||||||||||| Sbjct 749 ACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGG-TGCGGCTGATCGGCATGAACGCG 691 Query 46441 CAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAG 46500 || |||| | ||||||||||| || |||||||| ||||| ||| ||| | | Sbjct 690 GAGCTGATGTCGCAGTACATCGAGTTCGTGGCGGACCGGCTGCTTGTGTCGCTGGGGCTG 631 Query 46501 CCGAAGCATTTTCACGCG-CGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGG 46559 |||||| | |||| | |||| || || || || ||| | | ||||| ||| |||| Sbjct 630 GAGAAGCACTACCACGTGACGCAG-CCGTTCGACTTCATGGAGATGATCTCGCTGCAGGG 572 Query 46560 CAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| || || || ||||| ||| ||||||||||| Sbjct 571 CAAGACGAACTTCTTCGAGAAGAAGGTCGGCGAGTA 536 >seq1483 Length=4907 Score = 132 bits (146), Expect = 5e-26 Identities = 174/237 (73%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 131001 CCATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGT 131059 |||||| ||||||||||| || ||||| | || | ||||||||||| || ||||||| Sbjct 4337 CCATGATGCCACCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGT 4278 Query 131060 AATCGCTCATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGG 131118 | || | || | ||||| ||||| ||||||||||| ||| |||| | ||||||||| Sbjct 4277 AGTC-CGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGG 4219 Query 131119 TCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTG 131178 ||||| ||||| || || ||||| ||| ||| ||| | | ||| | || ||| | Sbjct 4218 TCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTC 4159 Query 131179 GACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 | ||||| |||| | | || || ||||| || || || ||||| ||||||||| Sbjct 4158 GCCTCGACCTCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 4102 >seq424 Length=20549 Score = 132 bits (146), Expect = 5e-26 Identities = 174/237 (73%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 131001 CCATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGT 131059 |||||| ||||||||||| || ||||| | || | ||||||||||| || ||||||| Sbjct 20249 CCATGATGCCACCGCGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGT 20308 Query 131060 AATCGCTCATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGG 131118 | || | || | ||||| ||||| ||||||||||| ||| |||| | ||||||||| Sbjct 20309 AGTC-CGCAAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGG 20367 Query 131119 TCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTG 131178 ||||| ||||| || || ||||| ||| ||| ||| | | ||| | || ||| | Sbjct 20368 TCCGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTC 20427 Query 131179 GACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 | ||||| |||| | | || || ||||| || || || ||||| ||||||||| Sbjct 20428 GCCTCGACCTCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 20484 >seq2938 Length=1608 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| |||||||| | || | ||||||||||| || |||||||| || Sbjct 1393 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCG 1452 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| || |||| | |||||||||||||| ||| Sbjct 1453 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGG 1512 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | ||| | || ||| ||| ||||| Sbjct 1513 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTGGCCTCGACC 1572 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 |||| | | || || ||||| || || || ||| Sbjct 1573 TCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACG 1608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471982125068160