Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq523 203 4e-47 seq2277 120 4e-22 >seq523 Length=17530 Score = 203 bits (224), Expect = 4e-47 Identities = 1075/1693 (63%), Gaps = 43/1693 (3%) Strand=Plus/Plus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 ||||| | || ||||| |||| ||||||||||| ||| || ||||| || | || Sbjct 471 GCCTTCGTGCGCAGGTAATACACACCCGTCTTGAGACCCGACTCCCAGGTGTAGAAGAGC 530 Query 113648 ATCGAGGACAACTTGG-AGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706 ||||| | | || |||| || || || | || ||||||||||| ||||| || Sbjct 531 ATCGACGTGATCTGACCAGAG-GTGGGGCTCTGCAGGAAGAGGTTCAGCGACTGGGACTG 589 Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCA 113766 |||||| | | || || || ||||| || |||| | | | ||| ||||| Sbjct 590 GTCGATGTACTGGCCGCGGTCGCGGGCCATGTCGATCAGCTTGCGCTGCGGGATCTCCCA 649 Query 113767 CACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCC 113826 ||| || | |||||| | ||| | || || ||||| |||| | ||| |||||| Sbjct 650 CACGGTGCGGTAGAGCTCCTTGAGGTCGTCCGGGATGCTGTCGATCGTCAGGACGGAGCC 709 Query 113827 ACCCGCCTTGACCATGAGATCCTTCAT-ATCCTTTGA--CCAGAGACCAATCTTTTTGAG 113883 | | |||| || ||| ||| | | ||| || || ||| |||| Sbjct 710 GTTG---TAGGAGATGATCTCATTCCGCATCGTCTCGTTCCACAGCCCGCGCTTGATGAG 766 Query 113884 ATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 113943 ||| |||||| | ||| || || || ||||| || || || | | || Sbjct 767 GTCCATCACGAGGTACTTGTTCACCACCGGGAACTCGCCACTCAGCACACGGCGGACGTA 826 Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGC 114003 ||| || | ||| ||||||| |||||||| ||||| || | ||| || | || || || Sbjct 827 GATGTTCGAGGTGAATGGCTCGAAGCACTCGTTGTTGCCGAGGATCTGCGACGTCGACGC 886 Query 114004 TGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACC--CTTTTCCCTAATGCGTTCC 114061 |||||||| || || | || ||| ||| || || || | | || | | | | Sbjct 887 GGTGGGCATCGGGGCGAGCAGGAGGGAGTTGCGCAGGCCGACCTGAACCACCTTC--TGC 944 Query 114062 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCC-------CTGCCACATATCAAA 114114 || ||| ||||||||| || || | ||| | || |||||| ||||| Sbjct 945 TTCAGGCTGTCCCAGTCCCAGC-GACCGCTGTTAGGACGCGGGTTCTTCCACATGTCAAA 1003 Query 114115 CTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTC 114174 ||| | ||| || ||| || || |||| || |||||||| ||||| || ||| Sbjct 1004 CTGCAAGATGCCCTGGCTCGCCGGACTGCCCTTGAAGGTCTCGTAAGGGCCTTCCTCCTT 1063 Query 114175 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 114234 |||||| || |||||| | || || || || ||||| || || ||||| Sbjct 1064 CGCCAACTCCATCGACGCCTCCACCGCGGCAAAGTAGATCGTCTCGAAGATCTCCGCATT 1123 Query 114235 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAG 114294 || || |||||| | | || | || || | ||| || ||||||| || Sbjct 1124 CACCCGCTGCGCCTCGGCACTGACGAAGGGCAGACGCAGTAGAATGAAGGCATCCGCCAG 1183 Query 114295 ACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCAC 114354 || || ||||||||||| | ||||| | | ||| || || || |||||||| Sbjct 1184 GCCCTGCACACCGAGGCCCACCGGGCGGTTGCGCATGTTGCTGCGGCGCGCCGTCTCCAC 1243 Query 114355 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414 || || | || | || || |||| || || || ||||| ||| |||| Sbjct 1244 CGGGTAGTAGTTGCGGTCAATGACCCGGTTCAGGTTGCGGGTGATCTGCTTCGTGACGCT 1303 Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 | ||| | || ||| | ||| |||| || || || | || |||||||| Sbjct 1304 GTACAGCAGCTGGTGATCCACCTCGCGCTTCTCCTCGTTCACGAAGCGCGGCAGGGCGAT 1363 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 || || || || ||||| | |||||| ||| |||||||| | |||||||| || Sbjct 1364 GGAGGCGAGGTTGCACACGGCGGTCTCCTCCGGCGACGTGTACTCGACGATTTCCGTGCA 1423 Query 114535 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 || || || | ||| || ||||| | |||||| || || ||||| |||| ||||| || Sbjct 1424 CAGGTTCGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGCGTC 1483 Query 114595 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 114654 |||||| || ||| | || || ||||| | || |||| ||| || || ||| || Sbjct 1484 CTTGTACAGAATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGGATGGCAAACCACAC 1543 Query 114655 ATCG-GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 114713 || ||| |||| | || | | || ||||| |||||||||| ||| ||| Sbjct 1544 CTCCTGCGCCTGGATCGTCTGCAC-GCCGCGGCCCTCTGCCTCGTACTTCTCGTACAGGC 1602 Query 114714 CTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT-GGGCAGAAGAGA 114772 || ||||| || || | || ||||| || || || ||| | || Sbjct 1603 GCTCGAACTCCTCGCCGTAGCAGTCACTCAGCCCCGG-GCACGCGCTCGGGTCCATCAGC 1661 Query 114773 GACCA-TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGA 114831 | ||| || || | ||| ||| | ||||||||||| ||||| |||||||| || || | Sbjct 1662 GTCCACTTCCCCTCGCTCTTCA-CTCGCTTCATGAACAGGTCCGGGATCCACAGCGCGTA 1720 Query 114832 GAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 114889 |||||| || || ||| ||| || || | || ||| | || | || |||| Sbjct 1721 GAAGAGGTCACGC--GCGCGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCAGCAGAAAG 1778 Query 114890 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGA 114946 | | ||| || || |||||||| |||||||| | |||| | ||||| || || Sbjct 1779 CCGAAGATGTCGGCATGCCACGGCTCCAGGTAGATGGCGAAGGCACCCTTGCGCTTACCG 1838 Query 114947 CCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCA 115006 || |||||| || || | || ||| || || || || ||||| || | | || Sbjct 1839 CCGCCCTGGTCCACGTAACGGGCAGTGTTGTTGAACACACGCAGCATCGGCACCAAGCCG 1898 Query 115007 TCAGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACATCATGGATGT 115064 | || || || || || ||| || | | || | || | |||| || Sbjct 1899 TTGGACGTCCCGTTCGTGCCGGCGATGTAGCTGCCGGC--GGAGCGGATGTTGTGGACGT 1956 Query 115065 GCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGA 115124 ||| || || || || ||| ||| ||| ||||||||| | || || |||||| Sbjct 1957 GCAGGCCGATGCCGCCCGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGTAGA 2016 Query 115125 TCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGA---CATTTGTGGCC 115181 | |||||||| ||| |||| |||| ||||||||| ||| ||| || ||| Sbjct 2017 TGCCGTCGATGCTGTCTTCCTTTGAAGCGACAAGGAAGCA---CGAGCTCATCTGCGGCT 2073 Query 115182 TTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCT 115241 | || || || |||||||||||||| || || |||||| |||| | || | |||||| Sbjct 2074 TCGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGGGTGAAGAAGCCGCGCGACATCA 2133 Query 115242 TATCGTAGGTCTC 115254 ||||| ||||| Sbjct 2134 GCTCGTACGTCTC 2146 >seq2277 Length=2457 Score = 120 bits (132), Expect = 4e-22 Identities = 161/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||| || |||||||| || ||||| || || || ||| ||| || ||||| || || Sbjct 838 GTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAGCCCCGGCATCAGCCC 897 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||||| |||||| | ||| || || || || ||||||||||| |||||||| Sbjct 898 GCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCGGAGAAGAAGATGCCCTCCACCGC 957 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGC 126237 |||||| | | || ||||| || | |||| | | | | |||| || ||| Sbjct 958 GGCGAACCCGATCAGCCGCTCCTGGAA-GCTCGCGCC--GCTCCCGATCCACCGCACCGC 1014 Query 126238 CCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 126279 ||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 1015 CCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 1056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597314779482920