Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2091 280 2e-70 seq655 250 3e-61 seq497 154 2e-32 >seq2091 Length=2857 Score = 280 bits (310), Expect = 2e-70 Identities = 843/1294 (65%), Gaps = 23/1294 (2%) Strand=Plus/Minus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || || ||||| || | | || | || || Sbjct 1709 CGTCGAGAAGATCTGGCTCTTCTTCGTCGGGATGGTCGTGTTGCGCTTGATCAGCGCCGT 1650 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || |||| || || | ||| || |||||||||| || | ||| Sbjct 1649 CATCACGCCACCGGCCGTCTCGATGCCGAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 1590 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | | ||| | || || | |||| || || |||| || ||| Sbjct 1589 GCCCTC--CGTCTGCTTGCTCTTGCCGCCGGTCAGGATGAACGCCTGCACCGCAGCGCCG 1532 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || ||||| |||||||| || | || ||||| || || ||| || | || Sbjct 1531 TACGCCACGGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCG 1472 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| |||| || | | Sbjct 1471 GACACAAGGCTCTGCACCTTCGGGATACGCGTGGACCCGCCCACCAGCACGACGTCGTGC 1412 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | || | || || || || | || | Sbjct 1411 ACGGAGCGCTTGTCCATCTTCGCATCCTGGAGCACGCGCTCCACCGGCTGGATCGTGCTG 1352 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || || || || || | | | ||| || Sbjct 1351 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCGCGCGTGATCGTGGCCTGGAAGTCC 1292 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || || || | ||| ||| Sbjct 1291 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCGGACGACAGCGTGCGC 1232 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || |||||||| ||||| || || | || || || || || || | || | || Sbjct 1231 TTGGCGCGCTCGCACGCGGTGCGCAGGCGGCGCAGAGCGCGGTGGCTCGACGACAGGTCC 1172 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || |||| ||| | ||| | ||||| Sbjct 1171 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGCTGAAGAACGTC--ACGAGGCGGTTATCGA 1114 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || ||||| || | ||| || || || ||| || || || || ||||| || || | Sbjct 1113 AGTCCTCACCGCCGAGGTGGGTGTCACCGTTGGTGGCCTTCACCTCGAAGATGCCGCCGT 1054 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | | || || ||||| |||||||| || ||||| || || || || ||||| Sbjct 1053 CGATCGTCAGCAGCGTCACATCGAACGTACCGCCGCCCAGATCGAAGATCAGCACGTTGC 994 Query 7581 TATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | |||| | | ||| || |||||||||||||| || || ||||| || || | Sbjct 993 GCTCCTTGCCGTCGTCGCCCTTGTCCAGACCGTACGCGATGGCGGCGGCCGTCGGCTCGT 934 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | ||| ||||| || || | || || |||||||| || || | Sbjct 933 TGATGATGCGCAGCACCTCCAGACCAGCGATCGTGCCGGCGTCCTTCGTCGCCTGACGCT 874 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 |||| ||||| |||||||| || ||||| || || || | | | || | ||| ||||| | Sbjct 873 GCGAGTCGTTGAAGTAGGCAGGCACCGTCACCACGGCCTTCTTCACCTGCTTGCCGAGGT 814 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || ||||| || ||||| || | || | Sbjct 813 ACGCCTCAGCCGTCTCCTTCATCTTCAGCAGCACCATGGAGCTGATCTCCTCCGGCGTGA 754 Query 7818 A---CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874 | || || | || |||| || | || |||| || || || || | | Sbjct 753 AGGTCTTTTCC---TCGCCGTGGAACTGCACCGTGATCACCGGCTTGTCGTCACCCTTCG 697 Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934 | ||||| | | ||| | ||||| || | || || ||| ||||| | Sbjct 696 TCGTCACCTTGAAGGGCCAGTGCTTCATGTCCGCCTGCACAACGGAGTCGTTGAACTTGC 637 Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994 || || || ||||| || || || || ||||| | |||||||| || ||||||| Sbjct 636 GGCCAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATCGCGACCTGGTTCT 577 Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054 |||| || || ||||| || || || | |||| |||||||||||||| || |||| Sbjct 576 TCGCGGCATCGCCGATCAGGCGCTCCGAGT---CCGTGAACGCGACGTACGACGGCGTCG 520 Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114 | || || || ||||||||||| || || || ||||| ||||| ||||| || ||||||| Sbjct 519 TGCGGTTACCCTGGTCGTTCGCGATGATCTCCACGCGCTCGTTCTGCCACACACCGACGC 460 Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||| ||||| || || | ||||||||| || || Sbjct 459 ACGAGTACGTCGTGCCCAGATCAATACCAATGGC 426 >seq655 Length=14210 Score = 250 bits (276), Expect = 3e-61 Identities = 478/698 (68%), Gaps = 15/698 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || ||||| || | ||| || || || || ||||| || || || || | ||| Sbjct 4472 TCGAAGTCCTCACCGCCGAGGTGGGTGTCACCGGCCGTCGCCTTCACCTCGAAAACACCG 4531 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | ||||| | | || || ||||| ||||| || || ||||| || || || || ||| Sbjct 4532 CTCTCAATCGTCAGCAGCGTCACATCGAACGTGCCGCCGCCCAGATCGAAGATCAGCACG 4591 Query 7577 TTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | ||| | | | |||||| || | ||||||||||| || || ||||| || Sbjct 4592 TTCTTCTCGCCCTTGTCGTTCTTGCGGTCCATGCCGTACGCGATGGCGGCGGCCGTCGGC 4651 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| ||||| ||||| | |||| || |||||||| || Sbjct 4652 TCGTTGATGATGCGCAGCACGTTGAGGCCCGCAATCGACCCCGCGTCCTTCGTCGCCTGA 4711 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || ||||| ||||| ||||| ||||| ||||| ||||| || ||| | || | ||| Sbjct 4712 CGCTGCGAGTCGTTGAAGTACGCCGGCACCGTCACGACGGCATCCTTCACGGGGGTGCCG 4771 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || | ||| || | || ||||| || || ||||| | || ||||| || | Sbjct 4772 AGGTAGGCTTCGGCCGTCTCCTTCATCTTCTGCAGCACCATGGCGGAGATCTCCTCCG-G 4830 Query 7814 GCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCG--CAGCA 7870 | | | || ||||| | || | | || || | |||| || || ||| | || Sbjct 4831 GAAGAAGGTCTTCGTCGCCCCTTGGTACTCCACGTTGATCACCGGCTT-CCCGTCCTTCA 4889 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | | | ||||| | | ||| | ||||| ||| || | | |||| |||| Sbjct 4890 C----GGTCACCTTGAAGGGCCAGTGCTTCATGTCGGACTGCAGATCCGGGTCATCAAAC 4945 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | || || | ||||| ||||| || || ||||| | |||||||| || ||| Sbjct 4946 TTGCGGCCAATCATCCGCTTCGCATCGAAGACGGTGTTGTGCGGGTTCATCGCGACCTGG 5005 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 |||||||| || || |||| || || || ||||||| || ||||||||||| || Sbjct 5006 TTCTTCGCGGCATCGCCGACCAGGCGCTC---CGTTTCCGTGAAGGCGACGTACGACGGC 5062 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 ||||| || || ||||| || ||||| || || || || ||||||| | ||||||| Sbjct 5063 GTCGTGCGGTTACCTTGATCATTCGCGATGATCTCCACCTGGTCGTTCTTGAAGACGCCC 5122 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||||| ||||| || || | ||||||||||| || Sbjct 5123 ACGCACGAGTACGTGGTGCCGAGGTCAATACCGATGGC 5160 >seq497 Length=18444 Score = 154 bits (170), Expect = 2e-32 Identities = 167/221 (76%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 7928 AACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTT 7987 ||||| | || || || ||||| || || || || ||||| | |||||||| || Sbjct 223 AACTTGCGGCCAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATCGCGACC 282 Query 7988 TGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGAT 8047 ||||||||||| || || ||||| || || || | |||| |||||||||||||| Sbjct 283 TGGTTCTTCGCGGCATCGCCGATCAGGCGCTCCGAGT---CCGTGAACGCGACGTACGAC 339 Query 8048 GGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACG 8107 || ||||| || || || ||||||||||| || || || ||||| ||||| ||||| ||| Sbjct 340 GGCGTCGTGCGGTTACCCTGGTCGTTCGCGATGATCTCCACGCGCTCGTTCTGCCACACG 399 Query 8108 CCGACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || |||||||| ||||| || || | ||||||||| || || Sbjct 400 CCAACGCACGAGTACGTCGTGCCCAGATCAATACCAATGGC 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635091524307160