Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq761 206 4e-48 >seq761 Length=12455 Score = 206 bits (228), Expect = 4e-48 Identities = 521/781 (67%), Gaps = 71/781 (9%) Strand=Plus/Minus Query 136687 TCCACGAGGTCCTTCTGGGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATT 136746 ||||||||||||| ||| || | || || ||||||||||||||||| || |||| || Sbjct 1477 TCCACGAGGTCCTGCTGTGCGGCGATCACGGCGTCGATGTCCTTGTACGCGGCCGGGGTT 1418 Query 136747 TCGTCGATCACGCCAGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCC 136806 ||||| | ||||| |||||||||||||||| | ||| |||||| || || Sbjct 1417 TCGTCCAGGACGCCGCCGTCCTTGCGGCACTCGATCCCCGACGTGGCCACCTCGTGATCG 1358 Query 136807 TCCAGGGTGAAG-GTCGCCTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTG 136862 | || |||||| | || | || ||| ||||| | | || ||| || || ||||| Sbjct 1357 GCGAGAGTGAAGCGGCGGCGTG-CCTCA--CCGCGGCTGTACCG-CCGTCCTGCACCGTG 1302 Query 136863 CGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCC 136922 | ||| |||||| | | ||| |||| |||||||||||||||||| ||||| Sbjct 1301 TGGGCAGGAGCAGTAGCTGGCCGTGCTGCCTTTGCCGCGCACGATGTAGCTGCGTGCCCC 1242 Query 136923 CATCGAGCCGGGGATGATCCCGAACTGGTCCTT--CTGCGCCGACACCGCGCCCTTGCGG 136980 |||||| || || |||| ||| | | |||| ||| || || ||||| ||||| Sbjct 1241 CATCGAACCAGGAATGACGGCGAGTTCG-CCTTGCCTG-GCGGAGGTGGCGCCTTTGCGC 1184 Query 136981 GTCACGAAGACC----------------CACTCG---TC----------GAAGTGGAAT- 137010 |||| | ||| ||| || || | || | ||| Sbjct 1183 GTCAGCCACACCTCCTGCACCTGCTGCTCACCCGCGGTCAGCGCACCAGGGAGGGTAATG 1124 Query 137011 TCCTTCTG---GACGTAGTTGTGGTGGCAGTTCA---CCGCTTCCTTGTCCGTCTTGAAC 137064 | | || | ||||||||||||||||||||||| |||||| | || || ||||| Sbjct 1123 TGCGTCCGCTCGACGTAGTTGTGGTGGCAGTTCACGGCCGCTTTCGTG---GTGGTGAAC 1067 Query 137065 GGCG--GCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGT 137122 |||| ||| | |||||||||| ||| |||| ||| | ||| ||||| || |||| Sbjct 1066 GGCGCCGCAATGC--ACGCCCGCATCGCCGCCAGCACCGCGTCCAGCATCACCTGCCGGT 1009 Query 137123 TGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCT 137182 | || |||||| | ||| |||| | ||||| | |||||||| || | || | Sbjct 1008 TCCACCACGCGAACTTCTGTGCCCACTCCACGGCAAAGATGTAGTCGTCAAAGTGCGTCG 949 Query 137183 CGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCA-CGACGCAGC 137241 |||||||| | | || ||||| |||| | | | || ||| | ||| | Sbjct 948 TGCCTTCGCGCAAGTAGGCGAGGTCAGCGTCCGGTAGGTGGC-----TCAGCTGCGCTCC 894 Query 137242 ATCATCTC-CTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGA 137300 |||||| ||| ||| |||||||||| | ||||||| |||||| || ||||| || Sbjct 893 GACATCTCTCTTTGCCAGTTCGATGAAGACGGCGCCGATGCGGTTGCCCACCCCGCGGGA 834 Query 137301 GCCCGAGTGGAGCATCACCCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTC 137351 ||| ||||| ||||||||||| ||| |||| | ||||| ||||||| ||| Sbjct 833 GCCGGAGTGCAGCATCACCCACACGTGGGGCTCCGGCTGCTGGTCGTCCAGGCAGAGCTC 774 Query 137352 GATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAG 137411 |||||| || ||||| ||| || ||||| || ||| || | ||| | |||| ||| Sbjct 773 GATGAAATGATTGCCCGTGCCGAGAGTGCCGAGGTGGTTCAGGTGGTTTGTCTTCTCCAG 714 Query 137412 C 137412 | Sbjct 713 C 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690099149266800