Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq761 141 2e-28 >seq761 Length=12455 Score = 141 bits (156), Expect = 2e-28 Identities = 506/780 (65%), Gaps = 62/780 (8%) Strand=Plus/Minus Query 168311 CTCCACCATTTCTTCCTGGGCCGCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGT 168370 |||||| | || | ||| || || || ||| ||||| |||||| || ||| || Sbjct 1478 CTCCACGAGGTCCTGCTGTGCGGCGATCACGGCGTCGATGTCCTTGTACGCGGCCGGGGT 1419 Query 168371 CTCGTCGATCACGCCTTCGTCCTTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTC 168430 ||||| | ||||| |||||||||||||||||| ||| |||||| | |||| || Sbjct 1418 TTCGTCCAGGACGCCGCCGTCCTTGCGGCACTCGATCCCCGACGTGGCCACCTCGTGATC 1359 Query 168431 GTCCAGGGAGACGAGCTTCTTCGCCGCCGAACGCGACATGACG--CGGCCGGCGCCGTGG 168488 | | || | || ||| | || | | |||| | || || || || ||||| Sbjct 1358 GGCGAGAGTGA--AGCGGCGGCGTGCCTCACCGCGGCTGTACCGCCGTCCTGCACCGTGT 1301 Query 168489 CTGCACGAGCAGAAGGCGTCAGCGTGGCCCTTGCCGCGCACGATGAA-CGACTTGGCGCC 168547 ||| |||||| || | | | | ||| ||||||||||||||| | | | || | || Sbjct 1300 GGGCAGGAGCAGTAGCTGGCCGTGCTGCCTTTGCCGCGCACGATGTAGCTGCGTGCC-CC 1242 Query 168548 CATCGAACCCGGAATGATGCCGAGTTCGTCCTT--CTGCGCCGACACCGCGCCCTTGCGG 168605 ||||||||| ||||||| | |||||||| |||| ||| || || ||||| ||||| Sbjct 1241 CATCGAACCAGGAATGACGGCGAGTTCG-CCTTGCCTG-GCGGAGGTGGCGCCTTTGCGC 1184 Query 168606 GTCACGAAGATGTCCT----------------CGC------CGAA---------GTGGCG 168634 |||| | | |||| ||| || | || | Sbjct 1183 GTCAGCCACACCTCCTGCACCTGCTGCTCACCCGCGGTCAGCGCACCAGGGAGGGTAATG 1124 Query 168635 TTC--CTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGAA---C 168689 | | | | ||||||||||||||| |||||||| || | || ||| |||| | Sbjct 1123 TGCGTCCGCTCGACGTAGTTGTGGTGGCAGTTCACGGCCGCTTTCGTGGTGGTGAACGGC 1064 Query 168690 GCCGGCACGAACTCCCGGATCGCCTTGAGCACGCGGACCATCATCATGTCGCGGTTCAGG 168749 |||| | | || |||| |||||| ||||| | ||| ||||| | |||||| Sbjct 1063 GCCGCAATGCACGCCCGCATCGCCGCCAGCACCGCGTCCAGCATCACCTGCCGGTTCCAC 1004 Query 168750 CGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGTCGTCGAAATCCTGCTCGCCC 168809 | |||||| | || ||||| ||||||| |||||||||||| || | | | || Sbjct 1003 CACGCGAACTTCTGTGCCCACTCCACGGCAAAGATGTAGTCGTCAAAGTGCGTCGTGC-- 946 Query 168810 ACTTCGAGC---CACGCGAGGTTCTCGTCCTG-CGGGCGCACA-TGGCGCTTTGCCAGGG 168864 ||||| || | ||||||| ||||| | || || || ||||| | || Sbjct 945 -CTTCGCGCAAGTAGGCGAGGTCAGCGTCCGGTAGGTGGCTCAGCTGCGCTCCGACA--T 889 Query 168865 CGTTCTTCGCCTTCTCGATGAAGTAGTTGCCGATCACGTTGCCGACGCCGCGCGATCCCG 168924 | |||| ||| ||||||||| | |||||| |||||| || ||||| || || | Sbjct 888 CTCTCTTTGCCAGTTCGATGAAGACGGCGCCGATGCGGTTGCCCACCCCGCGGGAGCCGG 829 Query 168925 AGTGCAGCATCACCCACACGTTCGGGTCCGTCGTCCCCTGATCGGTCTGGATGCAGATTT 168984 ||||||||||||||||||||| || || || | ||| ||| | | ||||| | Sbjct 828 AGTGCAGCATCACCCACACGTGGGGCTC---CGGCTGCTGGTCG---TCCAGGCAGAGCT 775 Query 168985 CGATGAAGTGGTTGCCGCCACCCAGCGACCCGAGTTGGGTCACGTTGTTCGACGTCTCCA 169044 ||||||| || ||||| || || | ||||| ||| ||| || ||| | | |||||| Sbjct 774 CGATGAAATGATTGCCCGTGCCGAGAGTGCCGAGGTGGTTCAGGTGGTTTGTCTTCTCCA 715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895708186381080