Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq761 140 5e-28 >seq761 Length=12455 Score = 140 bits (154), Expect = 5e-28 Identities = 489/753 (65%), Gaps = 48/753 (6%) Strand=Plus/Minus Query 139751 CTGGACGTAGTTGTGGTGGCAGTTCAC---CGCTTCCTTGTCCGTCTTGAAGGGCG--GC 139805 || |||||||||||||||||||||||| ||||| | || || |||| |||| || Sbjct 1115 CTCGACGTAGTTGTGGTGGCAGTTCACGGCCGCTTTCGTG---GTGGTGAACGGCGCCGC 1059 Query 139806 AGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCCGC 139865 | | | || ||||| || |||| ||| | || ||||| || ||||| || | Sbjct 1058 AATGC--ACGCCCGCATCGCCGCCAGCACCGCGTCCAGCATCACCTGCCGGTTCCACCAC 1001 Query 139866 GCGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGCTCGCCTTCC 139925 ||||| | ||| |||| | ||||| | |||||||| || | || | |||||| Sbjct 1000 GCGAACTTCTGTGCCCACTCCACGGCAAAGATGTAGTCGTCAAAGTGCGTCGTGCCTTCG 941 Query 139926 GACAGCCACGCGAGGTCCTTGTCGAGCGGCTTCTGACCGTCCCGACGCAGCATCATCTC- 139984 || | |||||||| ||| ||| || | | | ||| | |||||| Sbjct 940 CGCAAGTAGGCGAGGTCAGCGTC---CGGTAGGTGGCTCAGCTG-CGCTCCGACATCTCT 885 Query 139985 CTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 140044 ||| ||| |||||||||| ||||||| |||||| || ||||| ||||| ||||| Sbjct 884 CTTTGCCAGTTCGATGAAGACGGCGCCGATGCGGTTGCCCACCCCGCGGGAGCCGGAGTG 825 Query 140045 GAGCATCACCCAGACGCGCTGGTCC---------TCGTCGAGGCAGACCTCGATGAAGTG 140095 ||||||||||| ||| | | ||| ||||| ||||||| ||||||||| || Sbjct 824 CAGCATCACCCACACGTGGGGCTCCGGCTGCTGGTCGTCCAGGCAGAGCTCGATGAAATG 765 Query 140096 GTTGCCGCCGCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCTTGTA 140155 ||||| ||| || ||||| || ||| | | ||| | |||| || ||| Sbjct 764 ATTGCCCGTGCCGAGAGTGCCGAGGTGGTTCAGGTGGTTTGTCTTCTCCAGCACACCGTA 705 Query 140156 CTTGTCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCGAGTCGACCCACTTGCGCATGAT 140215 | ||| |||| ||| || | | | ||| |||| |||| |||| || Sbjct 704 GCGGCGGCACAGCTCCTCAAAGTCGCCGGCGAGGTG---GTCGCGCCACACGCGC-TGCA 649 Query 140216 CG--AGTTCGGGATGCCGCTACGCCCGTTCCAGCCGCCCGACGGAC-----CCGGC---- 140264 || || ||||| ||| |||| | | || ||| | || ||| | Sbjct 648 CGGCAGG-CGGGACATCGCCCCGCCACCCACCGGCGTCCGCGGCACTCTTGCCGCCATGG 590 Query 140265 ---CCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCGAGGCTGTCGGGC 140321 | ||||||||| || |||| | | | | |||||| || || ||||||| Sbjct 589 GTGCGGCCGTGCGGCACACGCAGCTCCACCGCCAACCGCAGCGCCGCCAGCGAGTCGGGC 530 Query 140322 AGGTCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCC 140381 | ||| || ||||||| || |||||| ||||||||||| || ||||| ||||| Sbjct 529 AAATCCCGTGCGGTCAGCGACGTCTCCACGGCGATCATGCCGCACCCAATGTCGACGCCG 470 Query 140382 ACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGCCC----ACGGTCGAGCC 140437 ||| || ||||||||||||| | |||||| | || |||| || ||||| |||| Sbjct 469 ACGCTGGCAGGGATGATGGCGCGCACGGTCGGCAGCA-CGAGGCCGACGACGGTGCAGCC 411 Query 140438 GATGCCCATGTGGACGTCCGGCATCAGGGCCAC 140470 || ||| ||| ||||| ||||| | ||| || Sbjct 410 CATCCCCGCGTGCACGTCTGGCATAACGGCGAC 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715729483507200