Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq761 168 9e-37 >seq761 Length=12455 Score = 168 bits (186), Expect = 9e-37 Identities = 478/723 (66%), Gaps = 71/723 (10%) Strand=Plus/Minus Query 137304 TTTCGTCGATCACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGT 137363 ||||||| | |||||| |||||||||||||||| | ||| |||||| || | Sbjct 1419 TTTCGTCCAGGACGCCGCCGTCCTTGCGGCACTCGATCCCCGACGTGGCCACCTCGTGAT 1360 Query 137364 CCTCCAGAGTGAAG-GTCGCCTTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCG 137419 | | ||||||||| | || | || ||| ||||| | | || ||| || || ||| Sbjct 1359 CGGCGAGAGTGAAGCGGCGGCGTG-CCTCA--CCGCGGCTGTACCG-CCGTCCTGCACCG 1304 Query 137420 TGCGAGCACGAGCAGAACGAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCC 137479 || | ||| |||||| | | ||| |||| |||||||||||||||||| ||| Sbjct 1303 TGTGGGCAGGAGCAGTAGCTGGCCGTGCTGCCTTTGCCGCGCACGATGTAGCTGCGTGCC 1244 Query 137480 CCCATCGAGCCGGGGATGATCCCGAACTGGTCCTT--CTGCGCCGACACCGCGCCCTTGC 137537 |||||||| || || |||| ||| | | |||| ||| || || ||||| |||| Sbjct 1243 CCCATCGAACCAGGAATGACGGCGAGTTCG-CCTTGCCTG-GCGGAGGTGGCGCCTTTGC 1186 Query 137538 GGGTCACGAAGACC----------------CACTCG---TC----------GAAGTGGAA 137568 | |||| | ||| ||| || || | || | || Sbjct 1185 GCGTCAGCCACACCTCCTGCACCTGCTGCTCACCCGCGGTCAGCGCACCAGGGAGGGTAA 1126 Query 137569 T-TCCTTCTG---GACGTAGTTGTGGTGGCAGTTCA---CCGCTTCCTTGTCCGTCTTGA 137621 | | | || | ||||||||||||||||||||||| |||||| | || || ||| Sbjct 1125 TGTGCGTCCGCTCGACGTAGTTGTGGTGGCAGTTCACGGCCGCTTTCGTG---GTGGTGA 1069 Query 137622 ACGGCG--GCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCG 137679 |||||| ||| | |||||||||| ||| |||| ||| | ||| ||||| || || Sbjct 1068 ACGGCGCCGCAATGC--ACGCCCGCATCGCCGCCAGCACCGCGTCCAGCATCACCTGCCG 1011 Query 137680 GTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGG 137739 ||| || |||||| | ||| |||| | ||||| | |||||||| || | || Sbjct 1010 GTTCCACCACGCGAACTTCTGTGCCCACTCCACGGCAAAGATGTAGTCGTCAAAGTGCGT 951 Query 137740 CTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCA-CGGCGCA 137798 | |||||||| | | || ||||| |||| | | | || ||| | |||| Sbjct 950 CGTGCCTTCGCGCAAGTAGGCGAGGTCAGCGTCCGGTAGGTGGC-----TCAGCTGCGCT 896 Query 137799 GCATCATCTC-CTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGC 137857 | |||||| ||| ||| |||||||||| | ||||||| |||||| || ||||| Sbjct 895 CCGACATCTCTCTTTGCCAGTTCGATGAAGACGGCGCCGATGCGGTTGCCCACCCCGCGG 836 Query 137858 GAGCCCGAGTGGAGCATCACCCAGACG---------CGCTGATCCTCGTCGAGGCAGACC 137908 ||||| ||||| ||||||||||| ||| |||| | ||||| ||||||| | Sbjct 835 GAGCCGGAGTGCAGCATCACCCACACGTGGGGCTCCGGCTGCTGGTCGTCCAGGCAGAGC 776 Query 137909 TCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTC 137968 |||||||| || ||||| ||| || ||||| || ||| || | ||| | |||| | Sbjct 775 TCGATGAAATGATTGCCCGTGCCGAGAGTGCCGAGGTGGTTCAGGTGGTTTGTCTTCTCC 716 Query 137969 AGC 137971 ||| Sbjct 715 AGC 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709675476967520