Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq761 156 6e-33 >seq761 Length=12455 Score = 156 bits (172), Expect = 6e-33 Identities = 285/413 (69%), Gaps = 26/413 (6%) Strand=Plus/Minus Query 136339 CTGGACGTAGTTGTGGTGGCAGTTCA---CCGCTTCCTTGTCCGTCTTGAACGGCG--GC 136393 || ||||||||||||||||||||||| |||||| | || || ||||||||| || Sbjct 1115 CTCGACGTAGTTGTGGTGGCAGTTCACGGCCGCTTTCGTG---GTGGTGAACGGCGCCGC 1059 Query 136394 AGGCCCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGC 136453 | | |||| ||||| ||| |||| ||| | ||| ||||| || ||||| || | Sbjct 1058 AATGC--ACGCCCGCATCGCCGCCAGCACCGCGTCCAGCATCACCTGCCGGTTCCACCAC 1001 Query 136454 GCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCG 136513 ||||| | ||| |||| | ||||| | |||||||| || | || | ||||||| Sbjct 1000 GCGAACTTCTGTGCCCACTCCACGGCAAAGATGTAGTCGTCAAAGTGCGTCGTGCCTTCG 941 Query 136514 CAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCGTCA-CGGCGCAGCATCATCTC 136572 | | | || ||||| |||| | || | ||| | |||| | |||||| Sbjct 940 CGCAAGTAGGCGAGGTCAGCGTCCGG-----TAGGTGGCTCAGCTGCGCTCCGACATCTC 886 Query 136573 -CTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGT 136631 ||| ||| |||||||||| | ||||||| |||||| || ||||| ||||| |||| Sbjct 885 TCTTTGCCAGTTCGATGAAGACGGCGCCGATGCGGTTGCCCACCCCGCGGGAGCCGGAGT 826 Query 136632 GGAGCATCACCCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGT 136682 | ||||||||||| ||| |||| | ||||| ||||||| ||||||||| | Sbjct 825 GCAGCATCACCCACACGTGGGGCTCCGGCTGCTGGTCGTCCAGGCAGAGCTCGATGAAAT 766 Query 136683 GGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGC 136735 | ||||| ||| || ||||| || ||| || | ||| | |||| |||| Sbjct 765 GATTGCCCGTGCCGAGAGTGCCGAGGTGGTTCAGGTGGTTTGTCTTCTCCAGC 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701317620159040