Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq523 96.9 1e-14 >seq523 Length=17530 Score = 96.9 bits (106), Expect = 1e-14 Identities = 195/284 (69%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || || || ||||||| | || || |||| || || || || Sbjct 1362 ATGGAGGCGAGGTTGCACACGGCGGTCTCCTCCGGCGACG-TGTACTCGACGATTTCCGT 1420 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||||||| || | |||||| ||||| | ||||||||||| || || ||||| || || Sbjct 1421 GCACAGGTTCGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 1480 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 |||||||| |||||| | ||| || ||||| ||||| | || || || | ||| Sbjct 1481 GTCCTTGTACAGAATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGGATGGCAAACCA 1540 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACA- 155826 | || | || | || || | | ||| || | ||| || ||| |||| Sbjct 1541 CACCTCCTGCGCCTGGATCGTCTGCACGCCGCGGCCCTCTGCCTCGTACTTCTCGTACAG 1600 Query 155827 GCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 ||| || | | ||||| ||||| || |||||||| || |||||| Sbjct 1601 GCGCTC-GAACTCCTCGCCGTAGCAGTCACTCAGCCCCGGGCAC 1643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471719559010063