Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq761 116 1e-21 >seq761 Length=12455 Score = 116 bits (128), Expect = 1e-21 Identities = 214/312 (69%), Gaps = 4/312 (1%) Strand=Plus/Plus Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCA--TTCATCGTTCGCGGCA 37261 ||||| || | | |||| ||||| |||||||| || | || | |||||| ||||||| Sbjct 1212 GGCGAACTCGCCGTCATTCCTGGTTCGATGGGGGC--ACGCAGCTACATCGTGCGCGGCA 1269 Query 37262 AGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGG 37321 | || | | | | |||||| ||| |||||||| || || | ||||| | Sbjct 1270 AAGGCAGCACGGCCAGCTACTGCTCCTGCCCACACGGTGCAGGACGGCGGTACAGCCGCG 1329 Query 37322 CCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGT 37381 || ||| ||||| ||||| ||| ||||| |||| |||||| || ||||||| Sbjct 1330 GTGAGGCACGCCGCCGCTTCACTCTCGCCGATCACGAGGTGGCCACGTCGGGGATCGAGT 1389 Query 37382 GCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGG 37441 ||||||| || | || || | ||||| || || || || |||||||||||||| || | Sbjct 1390 GCCGCAAGGACGGCGGCGTCCTGGACGAAACCCCGGCCGCGTACAAGGACATCGACGCCG 1449 Query 37442 TCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCG 37501 | || ||||| || | ||| ||||| | ||| | |||| || || | |||| Sbjct 1450 TGATCGCCGCACAGCAGGACCTCGTGGAGGTGGTGACGGTGTTGCGGCAGATCCTGTGCG 1509 Query 37502 TGAAGGGTTGAG 37513 |||| || |||| Sbjct 1510 TGAAAGGCTGAG 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139274600916388