Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq523 84.2 2e-11 >seq523 Length=17530 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/259 (68%), Gaps = 5/259 (2%) Strand=Plus/Plus Query 131740 AAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT 131799 |||| | || ||||| |||||||| || |||| || | || | || || |||||||| Sbjct 1775 AAAGCCGAAGATGTCGGCATGCCACGGCTCCAGGTAGATGGCGAAGGCACCCTTGCGCTT 1834 Query 131800 ACCGCCT---TGATTAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAA 131856 |||||| || | || | ||| | |||||||| | || |||| ||| ||| |||| Sbjct 1835 ACCGCCGCCCTGGTCCACGTAACGGGCAGTGTTGTTGAACACACGCAGCATCGGCACCAA 1894 Query 131857 ACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAAC 131916 ||||||| | || || |||| ||||||||||| || | ||| ||||| || Sbjct 1895 GCCGTTGGACGTCCCGTTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGGAC 1954 Query 131917 GTTGAGTCCAATACC-TCCGCCGTATTTAGAGATTAGTGCGCATTTGGTTAGAGTGTTAT 131975 || || || || || |||||| || ||| | ||||| | | || |||| | Sbjct 1955 GTGCAGGCCGATGCCGCCCGCCG-CCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGT 2013 Query 131976 AGATACCTTCCACGCTGTC 131994 |||| || || | |||||| Sbjct 2014 AGATGCCGTCGATGCTGTC 2032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424907474961288