Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq2277 96.9 4e-15 >seq2277 Length=2457 Score = 96.9 bits (106), Expect = 4e-15 Identities = 183/267 (69%), Gaps = 3/267 (1%) Strand=Plus/Minus Query 94678 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 94737 |||| ||| || | ||| | | |||||| || ||| | | || ||||| || | Sbjct 1101 GACACGTACATCACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGATC 1042 Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 94797 ||||| || || ||||| ||||| ||||| || |||| | | | | |||| | Sbjct 1041 CCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGGAGC--GGCGCGAGC- 985 Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || ||||| || ||| || || || ||||| ||||||||||| || || ||| Sbjct 984 TTCCAGGAGCGGCTGATCGGGTTCGCCGCGGTGGAGGGCATCTTCTTCTCCGGGTCGTTC 925 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 ||||| | | ||||| |||||||| || || ||||| || || ||| ||||||| Sbjct 924 TGCGCGCTGTTCTGGCTGAAGAAGCGCGGGCTGATGCCGGGGCTGACGTTCAGCAACGAG 865 Query 94918 CTTATCTCTCGTGACGAGGGACTCCAC 94944 || ||||| || |||||||| || ||| Sbjct 864 CTGATCTCGCGCGACGAGGGCCTGCAC 838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583222895338760