Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20acanthocephali_20[genbank_20GCA_5F000482105.1_202013-10- 25] 5,199 sequences; 33,783,172 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1483 107 2e-18 seq424 107 2e-18 >seq1483 Length=4907 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || |||||||||||| | || | || || || || || Sbjct 4101 CCATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTCGAGGTCGAGGCGA 4160 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 |||| |||| |||| || || || || || ||||| || ||||| || || || | Sbjct 4161 GCGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACC 4220 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| | || | ||||||||| || |||| || | || || | || |||| Sbjct 4221 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACA 4280 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||||||||| | || |||| | || |||| |||||||| Sbjct 4281 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGTGGCAT 4332 >seq424 Length=20549 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 26986 CCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGT 27045 |||||||||| || || || || |||||||||||| | || | || || || || || Sbjct 20485 CCATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTCGAGGTCGAGGCGA 20426 Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105 |||| |||| |||| || || || || || ||||| || ||||| || || || | Sbjct 20425 GCGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACC 20366 Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165 | ||||| | || | ||||||||| || |||| || | || || | || |||| Sbjct 20365 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTACA 20306 Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||| || ||||||||||| | || |||| | || |||| |||||||| Sbjct 20305 ACATCCAGAAGGAGTCGACGCTGCACCTGGTGCTCCGCCTGCGCGGTGGCAT 20254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434890135740480