Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2637 165 1e-35 >seq2637 Length=10591 Score = 165 bits (182), Expect = 1e-35 Identities = 409/615 (67%), Gaps = 17/615 (3%) Strand=Plus/Plus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC- 145739 ||||| | |||||||||| || ||||||||||||||| || ||| ||| | | || Sbjct 8753 TTCAGCGCCTCCACGTGGGTGCTGTAGACGTGCGCGTCGCCGAGGGTGTGCACCAGCTCA 8812 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 ||||| | | ||||| || | ||||| || |||| || ||||| || || Sbjct 8813 CCCGGACGC-AGGCCAGTCGCCTTGGCGATCAAAATCGTCAAGAGCGAGTACGACGCGAT 8871 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859 |||||| ||||| || || |||||||| | |||||||| |||||| |||||| || || Sbjct 8872 GTTGAACGGCACGCCAAGACCCATGTCGCATGAGCGCTGATACAGCATGCAGGACAGTTC 8931 Query 145860 C-CCGCCCG-----CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGC 145913 | | | | ||||| ||||| | || |||||||| ||||| || ||||| Sbjct 8932 CTTTGTCTGTGTGTTTACGTAAAACTGACCAAGCAGGTGGCATGGCGGAAGTGCCATCTT 8991 Query 145914 GGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTT 145973 | |||| | |||||||| || |||| | |||| | | | |||||| |||| Sbjct 8992 GTGCAGAGCACAGGGGTTCCACGCCGTGAAAAGCAGCCGACGGTCATTCGGGTTCGTCTT 9051 Query 145974 GA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 || ||||| | ||| | | ||| ||| |||||||| | || ||| | | | Sbjct 9052 GAGCGTCTCCACGATC---TGCTTGATCTGATCCACGCCTTCGCCGTCGTAGTTCGCGTC 9108 Query 146031 GGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC 146090 || || |||| | || |||||||| | ||||||||| ||||| || || || ||||| Sbjct 9109 AAAGCCCTTGTACTCAGCACCGAAGTGGCGCCACTGGAAGCCGTACACCGGACCGAGGTC 9168 Query 146091 CCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTC 146150 | || | | | ||||||| | | | ||||| || ||||| || || |||| Sbjct 9169 CATCACCTTGTTTTCCGTCAGCCCGCGGCTGTCAAGGAACTCACGGGAACCATTACCGTC 9228 Query 146151 CCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCA 146210 |||||| | | | || | | | ||| | | | ||| |||| | ||||| Sbjct 9229 CCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCATTCGTCTCGCCCCGCAGAAACCA 9288 Query 146211 GAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAACTG 146270 | ||||| ||| || || | ||||||||||| ||| || |||||||| || | ||| Sbjct 9289 AATTAGCTCCTCGCACACGCCACGCCAGAAGACCCGCTTCGTCGTCAGCAGCGGCAGCTG 9348 Query 146271 ---GCCCCGCAGGGA 146282 | |||| ||||| Sbjct 9349 GTTGTCCCGAAGGGA 9363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590052215925320