Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq747 91.5 2e-13 seq3268 86.0 8e-12 >seq747 Length=17186 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 || ||||| |||| || || || || |||||||| ||| || | | | || ||| Sbjct 6315 TCTTTGCCGCCCTGCAGGCGTGTACCGAACTGACCATCCTTGCGCAGAAGCGGGACGTTG 6256 Query 126268 TTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCAC-AGGTTCTGCTCGCC 126326 ||| || |||||||||||||| | ||||||||||| |||| || |||||| || Sbjct 6255 TTGCTGCCAACAAAGTCCTGCGCCATGGCGACAATGGTCT-GCACAAGCGACTGCTCACC 6197 Query 126327 GTGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGAT 126380 ||| | |||| ||| ||||| | ||||||||| |||||| | |||||||| Sbjct 6196 GTGGTGGTAGGCGGAATGCTCCGAGACGTAGCCGGAGAGCTGCACTACCTTGAT 6143 >seq3268 Length=64983 Score = 86.0 bits (94), Expect = 8e-12 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCT-GGTATGGCGCAAAAGGGCACGTGCGGCATGAT 15108 ||| | ||||| |||||||| ||| | || | || ||| ||||||||| ||| || Sbjct 59970 CCCAACATTGGTGACAAGTTCTGCAGTCGGCACGG-GCAGAAGGGCACGAACGGTATTCA 60028 Query 15109 TTTCCCCCAGGAAGACATGCCCTT-TACCGCGTCAGGCATGACGCCCGACATTATCATCA 15167 |||| ||||||||||||||||| |||||| | ||||| ||| ||| | ||||||| Sbjct 60029 GTTCCGACAGGAAGACATGCCCTTCAACCGCGAC-GGCATCGTGCCGGACCTCATCATCA 60087 Query 15168 ACCCCAACTGCATCCCGTCCCGCATGAC 15195 | ||| || ||| || || |||||||| Sbjct 60088 ATCCCCACGCCATTCCCTCACGCATGAC 60115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611366527880800