Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1439 156 7e-33 seq1438 156 7e-33 seq1113 156 7e-33 seq910 156 7e-33 >seq1439 Length=11893 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 74 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 133 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 134 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 193 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 194 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 252 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 253 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 312 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 313 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 372 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 373 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 432 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 433 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 491 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 492 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 548 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 549 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 608 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 609 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 668 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 669 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 728 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 729 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 788 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 789 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCATTGCCC 845 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 846 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 902 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 903 ATGTCGTG 910 >seq1438 Length=1320 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 74 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 133 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 134 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 193 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 194 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 252 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 253 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 312 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 313 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 372 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 373 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 432 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 433 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 491 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 492 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 548 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 549 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 608 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 609 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 668 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 669 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 728 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 729 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 788 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 789 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCATTGCCC 845 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 846 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 902 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 903 ATGTCGTG 910 >seq1113 Length=1237 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 338 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 397 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 398 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 457 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 458 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 516 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 517 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 576 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 577 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 636 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 637 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 696 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 697 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 755 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 756 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 812 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 813 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 872 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 873 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 932 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 933 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 992 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 993 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 1052 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 1053 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCATTGCCC 1109 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 1110 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 1166 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 1167 ATGTCGTG 1174 >seq910 Length=2952 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 2053 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 2112 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 2113 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 2172 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 2173 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 2231 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 2232 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 2291 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 2292 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 2351 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 2352 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 2411 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 2412 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 2470 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 2471 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 2527 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 2528 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 2587 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 2588 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 2647 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 2648 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 2707 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 2708 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 2767 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 2768 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCATTGCCC 2824 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 2825 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 2881 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 2882 ATGTCGTG 2889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795122071846480