Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq3268 84.2 2e-11 >seq3268 Length=64983 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/147 (76%), Gaps = 8/147 (5%) Strand=Plus/Plus Query 52053 ATGGGCGACAAGTT-TGC-GTCGTTCACGGCGCAAAAGGGGACGTGCGGAG--CCGTCCT 52108 || || |||||||| ||| |||| ||||| ||| ||||| ||| ||| | || | Sbjct 59976 ATTGGTGACAAGTTCTGCAGTCGG-CACGG-GCAGAAGGGCACGAACGGTATTCAGTTCC 60033 Query 52109 GACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 52168 ||| |||| |||||||||||| || ||||| | ||||| |||||||||||||| || Sbjct 60034 GAC--AGGAAGACATGCCCTTCAACCGCGACGGCATCGTGCCGGACCTCATCATCAATCC 60091 Query 52169 CCACGCCTTTCCATCCAGGATGACCGT 52195 ||||||| |||| || | ||||| || Sbjct 60092 CCACGCCATTCCCTCACGCATGACGGT 60118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408601001570009