Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq1164 127 3e-24 >seq1164 Length=56265 Score = 127 bits (140), Expect = 3e-24 Identities = 263/387 (68%), Gaps = 16/387 (4%) Strand=Plus/Plus Query 137013 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 137072 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 7866 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 7925 Query 137073 GCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 137132 || ||||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 7926 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 7985 Query 137133 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCA 137192 || ||| |||| | ||||| | |||||||| ||||| | || |||| Sbjct 7986 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 8045 Query 137193 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACGAC-GCAGCATCATCTC-C 137250 || | || || |||| |||| || | ||| | ||| || | | ||| | Sbjct 8046 CAGATACGCCAGATCCTCGTCCGGCAG---GCGAC--TCAGTTGTGCGCCGACGTCTTTC 8100 Query 137251 TTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGG 137310 |||||| ||||||||||||| ||| || |||||| || ||||||||||| || ||| Sbjct 8101 TTGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATGG 8160 Query 137311 AGCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGG 137361 ||||||||||| || || | || | || || || |||| ||||||||||||| Sbjct 8161 AGCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAAGTGG 8220 Query 137362 TTGCCGCCGCCCAGGGTGCCCAGTTGG 137388 ||||| |||||||||||| || ||| Sbjct 8221 TTGCCAGTGCCCAGGGTGCCGAGGTGG 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690115246875600