Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq1164 127 3e-24 >seq1164 Length=56265 Score = 127 bits (140), Expect = 3e-24 Identities = 264/391 (68%), Gaps = 24/391 (6%) Strand=Plus/Plus Query 135773 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 135832 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 7866 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 7925 Query 135833 GCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 135892 || ||||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 7926 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 7985 Query 135893 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGTTCGCCTTCGCA 135952 || ||| |||| | ||||| | |||||||| ||||| | | || |||| Sbjct 7986 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 8045 Query 135953 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCA------CGCCGCAGCATCAT 136006 || | || || |||| |||| || | ||| | ||| ||||| | | Sbjct 8046 CAGATACGCCAGATCCTCGTCCGGCAG---GCGAC--TCAGTTGTGCGCCGACGTCT--- 8097 Query 136007 CTCCTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGA 136066 | ||||||| |||||||||||| ||| || |||||| || ||||||||||| || Sbjct 8098 -TTCTTGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGA 8156 Query 136067 GTGGAGCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAA 136117 |||||||||||||| || || | || | || || || |||| ||||||||| Sbjct 8157 ATGGAGCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAA 8216 Query 136118 GTGGTTGCCGCCGCCCAGGGTGCCCAGTTGG 136148 ||||||||| |||||||||||| || ||| Sbjct 8217 GTGGTTGCCAGTGCCCAGGGTGCCGAGGTGG 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700415617718520