Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1164 131 2e-25 >seq1164 Length=56265 Score = 131 bits (144), Expect = 2e-25 Identities = 264/387 (68%), Gaps = 16/387 (4%) Strand=Plus/Plus Query 137572 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 137631 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 7866 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 7925 Query 137632 GCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 137691 || ||||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 7926 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 7985 Query 137692 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCA 137751 || ||| |||| | ||||| | |||||||| ||||| | || |||| Sbjct 7986 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 8045 Query 137752 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACG-GCGCAGCATCATCTC-C 137809 || | || || |||| |||| || | ||| | ||| | || | | ||| | Sbjct 8046 CAGATACGCCAGATCCTCGTCCGGCAG---GCGAC--TCAGTTGTGCGCCGACGTCTTTC 8100 Query 137810 TTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGG 137869 |||||| ||||||||||||| ||| || |||||| || ||||||||||| || ||| Sbjct 8101 TTGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATGG 8160 Query 137870 AGCATCACCCAGAC--GC-------GCTGATCCTCGTCGAGGCAGACCTCGATGAAGTGG 137920 ||||||||||| || || | || | || || || |||| ||||||||||||| Sbjct 8161 AGCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAAGTGG 8220 Query 137921 TTGCCGCCGCCCAGGGTGCCCAGTTGG 137947 ||||| |||||||||||| || ||| Sbjct 8221 TTGCCAGTGCCCAGGGTGCCGAGGTGG 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709692031223840