Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq1164 123 3e-23 >seq1164 Length=56265 Score = 123 bits (136), Expect = 3e-23 Identities = 261/386 (68%), Gaps = 14/386 (4%) Strand=Plus/Plus Query 136336 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 136395 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 7866 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 7925 Query 136396 GCCCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 136455 || | ||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 7926 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 7985 Query 136456 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCA 136515 || ||| |||| | ||||| | |||||||| ||||| | || |||| Sbjct 7986 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 8045 Query 136516 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCGTCACGGCGCAGCATCATCTC-CT 136574 || | || || |||| |||| || | || | | |||| | | ||| || Sbjct 8046 CAGATACGCCAGATCCTCGTCCGGCAGGCGACTCAGTTGT--GCGCCGA--CGTCTTTCT 8101 Query 136575 TGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGA 136634 ||||| ||||||||||||| ||| || |||||| || ||||||||||| || |||| Sbjct 8102 TGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATGGA 8161 Query 136635 GCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGT 136685 |||||||||| || || | || | || || || |||| |||||||||||||| Sbjct 8162 GCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAAGTGGT 8221 Query 136686 TGCCGCCGCCCAGGGTGCCCAGTTGG 136711 |||| |||||||||||| || ||| Sbjct 8222 TGCCAGTGCCCAGGGTGCCGAGGTGG 8247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701333979455680