Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1890 123 5e-23 >seq1890 Length=30326 Score = 123 bits (136), Expect = 5e-23 Identities = 514/799 (64%), Gaps = 13/799 (2%) Strand=Plus/Plus Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761 ||||| | | ||| ||||| ||||| ||| ||| || ||| |||| | ||| Sbjct 23836 AGGGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTCTGGCGAGGTGTACTCGACAATC 23895 Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821 || || || ||||| |||||||||||| || |||| || || || ||||| | ||| Sbjct 23896 TCCGTGCACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTTGACTTACTGTTG 23955 Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881 || |||||||| || || || || |||| ||||| | ||| | | | || || | Sbjct 23956 CACGCATCCTTGTAAAGGATGAACGGCACGCCTGTCTCGATCTGCGACTCGAGGATGGCG 24015 Query 221882 TCCCAGAGTTCTCTGGCGCTCAC-CGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACC 221939 ||| | || ||| || | |||| | || || ||||| | || | | | Sbjct 24016 AACCACACCTC-CTGCGCCTGAATCGTCTGCAC-ACCGCGGCCCTCCGCCTCGTAACGCT 24073 Query 221940 CGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGG-CG 221998 | ||| || || |||| || ||||| ||| || |||||||| || || Sbjct 24074 C---ATACAGACGCTCGAACTCCTCGCCGTAGCAGTCGCTGAGACCTGGACAGGTGCTCG 24130 Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 || | |||||| |||| | | | || || | || |||||||||||| || ||| Sbjct 24131 GGTC-CATCAGCGTCCACTTCCCCTCCGACTTCACACGCTTCATGAAGAGGTCGGGAATC 24189 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||||||| | || || || | | ||||| || ||| |||| |||| | |||| Sbjct 24190 CACAGCGCGTAGAACAGGTCGCGTGCACGCTGGTCGTCCTTGCCGGTGTTACGCTTCAGC 24249 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 || |||| | || ||||| |||||||||||||| ||||| ||||| | || || Sbjct 24250 AGCAGAAACCCGAAGATGTCGGCGTGCCACGGCTCAAGATACACGGCAAAGGCACCTTTG 24309 Query 222179 CGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGT 222238 ||||| ||||||||| ||||| | | |||||||| || || | ||| Sbjct 24310 CGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACACGCAGCATGGGT 24369 Query 222239 ACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTA 222298 |||| || || || || || ||||| ||||| ||| ||| | | ||| Sbjct 24370 ACCAAACCATTTGACGTGCCATTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGAATGTTG 24429 Query 222299 CTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTG 222358 || || || || || ||||| || ||| | ||| || ||| || || Sbjct 24430 TGCACATGCAAACCAATGCCGCCGGCAGCCTTGCTGATGACGGCACACTCCTTCAGTGTA 24489 Query 222359 TCCATGATGCCCTCCATAGAGTCCTCCTT-GACGTTCAGC-AGAAAACAAGACGACATCT 222416 || ||| || || ||| ||| ||||| |||| || | || || ||||| ||||| Sbjct 24490 TCGTAGATACCATCAATACTGTCTTCCTTCGACG--CAACGAGGAAGCAAGAGCTCATCT 24547 Query 222417 GAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAG 222476 | | || | | | ||||| || || || || | ||||| || ||| | ||| | | Sbjct 24548 GCGGCTTCGGCGTGCCAGCGTTGAAGAGGGTCGGGGTAGCGTGCGTGAAGAAACCCTTCG 24607 Query 222477 ACATCAGATCGTACGTCTC 222495 ||||||| ||||||||||| Sbjct 24608 ACATCAGCTCGTACGTCTC 24626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928806102003520