Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1890 100 3e-16 >seq1890 Length=30326 Score = 100 bits (110), Expect = 3e-16 Identities = 510/799 (64%), Gaps = 13/799 (2%) Strand=Plus/Minus Query 75275 GAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAAT 75334 ||||| ||||| |||||| | ||| | |||| ||||| || || ||||||||||| Sbjct 24626 GAGACGTACGAGCTGATGTCGAAGGGTTTCTTCACGCACGCTACCCCGACCCTCTTCAAC 24567 Query 75335 GCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCA 75394 ||||| || || | ||||||||| | ||||||||| | || ||||| ||| Sbjct 24566 GCTGGCACGCCGAAGCCGCAGATGAGCTCTTGCTTCCTCGTTGCGTCGAAGGAAGACAGT 24507 Query 75395 ATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGT 75454 || | |||||||| | || || | ||||||||| ||| ||| || || || Sbjct 24506 ATTGATGGTATCTACGATACACTGAAGGAGTGTGCCGTCATCAGCAAGGCTGCCGGCGGC 24447 Query 75455 ATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAAATGG 75513 ||||| |||| | || | | | || | || || || || ||||| Sbjct 24446 ATTGGTTTGCATGTGCACAACATTCGCTCCGCCGGCAGCTAC-ATCGCCGGCACGAATGG 24388 Query 75514 TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAA 75573 ||| ||||| | | || ||||| || || || ||| ||| || ||||| || | Sbjct 24387 CACGTCAAATGGTTTGGTACCCATGCTGCGTGTCTTCAACAACACCGCCCGCTACGTGGA 24328 Query 75574 TCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGA 75630 || | || || ||||| || || | || || || | || || ||||| ||||| Sbjct 24327 CCAGGGTGGCGGTAAGCGCAAAGGTGCCTTTGCCGTGTATCTTGAGCCGTGGCACGCCGA 24268 Query 75631 TATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAG 75689 ||| | | ||| || | | | ||| || | || || || || | | | Sbjct 24267 CATCTTCGGGTTTCTGCTGCTGAAGCGTAACACCGGCAAGGACGACCAGCG-TGCACGCG 24209 Query 75690 ATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTC 75749 | || || | | ||||||||||| ||||| ||||||||||| || || || || Sbjct 24208 ACCTGTTCTACGCGCTGTGGATTCCCGACCTCTTCATGAAGCGTGTGAAGTCGGAGGGGA 24149 Query 75750 AATGGTCTCTTTTCTGTCCAGA-CAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAG 75808 | ||| | || | | || || || ||||||||| |||| || |||||| Sbjct 24148 AGTGGACGCTGATG-GACCCGAGCACCTGTCCAGGTCTCAGCGACTGCTACGGCGAGGAG 24090 Query 75809 TTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC-GACTGTACCAGC 75867 || || || || || || | |||||| | | ||| ||| | | || Sbjct 24089 TTCGAGCGTCTGTATGAGCGTTACGAGGCGGAGGGCCGCGGTG-TGCAGACGATTC-AGG 24032 Query 75868 CGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 ||| | | || ||| || || ||| | || |||| ||||| || || | || | Sbjct 24031 CGCAGGAGGTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACAGGCGTGCCGTTCATCC 23972 Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986 ||||||||||||| || |||| ||| ||||| ||||| | || || |||||| ||| Sbjct 23971 TTTACAAGGATGCGTGCAACAGTAAGTCAAACCAGAAGAACCTCGGCACCATCAAGTGCT 23912 Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATT 76046 | || || |||||||| ||| | |||||||| || |||||||| || ||||| Sbjct 23911 CGAACCTGTGCACGGAGATTGTCGAGTACACCTCGCCAGAGGAGACGGCGGTGTGCAACC 23852 Query 76047 TGGCATCAATCGCCCTTCC 76065 | || || |||||||| || Sbjct 23851 TCGCCTCCATCGCCCTGCC 23833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596544745419040