Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1439 179 5e-39 seq1438 179 5e-39 seq1113 179 5e-39 seq910 179 5e-39 seq1890 147 3e-29 seq2639 93.3 5e-13 >seq1439 Length=11893 Score = 179 bits (198), Expect = 5e-39 Identities = 235/321 (73%), Gaps = 11/321 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| |||||||||||| | |||||| ||||| |||||||||| |||||||| Sbjct 56 CGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGAT 115 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC---TTGTAGTGCTTTTCGCATCCGAGCGA 868806 || |||||| | ||| || | ||||| ||||||||||| || || ||||| Sbjct 116 CATCTCCATGAAGTCGAAGGGCT---GCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGA 172 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 | | ||||| ||||| ||||| |||||||||||||| |||| || | ||||||||||| Sbjct 173 CACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCC 232 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 ||| ||| ||||||||||| |||| | |||||| |||||| | || || || || Sbjct 233 GATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCAC 292 Query 868927 GATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCA 868982 |||||||| || | | || ||| || ||||| |||| | || |||| |||| Sbjct 293 GATGATCT-CCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCA 351 Query 868983 GGCAGGCAAAGTCGCAGTGCA 869003 |||| || ||||| ||||| Sbjct 352 GGCACGCGAAGTCCGTGTGCA 372 Score = 134 bits (148), Expect = 2e-25 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || | |||||||||||| || || | | |||| | ||| | Sbjct 652 CCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCT 711 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || ||||||| || || ||||||||| |||||| ||||||||| |||||| Sbjct 712 TCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGA 771 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||| ||||| ||||| | ||| | |||||| Sbjct 772 AGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCT 831 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 |||| || ||||| | |||||| |||||||| || ||| || |||| Sbjct 832 TCATGTCATTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGT 891 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGC 869930 || | ||| | | ||||| ||| ||||| || || ||||| ||||| || Sbjct 892 ACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGGAACGGGTTCTCCT 951 Query 869931 GCAACAGGGGTTCG 869944 || ||| || ||| Sbjct 952 GCTGCAGCGGCTCG 965 Score = 132 bits (146), Expect = 6e-25 Identities = 200/285 (70%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| |||||||| || | | ||| ||||| || ||||||||| Sbjct 375 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 434 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || | |||||||| |||||||| |||||||| || || ||||||||| Sbjct 435 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 494 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| |||||||| |||| | || || || ||||||| || |||||| Sbjct 495 CCGATCAGCCGCTCCTGAAAGCTCGCGCCGC------TGCCGATCCACCGCACCGCCCAC 548 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | |||| | ||| | ||| ||| | | || | ||| || Sbjct 549 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 608 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||| ||| || ||||| | ||| | ||| || |||||| Sbjct 609 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCC 653 >seq1438 Length=1320 Score = 179 bits (198), Expect = 5e-39 Identities = 235/321 (73%), Gaps = 11/321 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| |||||||||||| | |||||| ||||| |||||||||| |||||||| Sbjct 56 CGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGAT 115 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC---TTGTAGTGCTTTTCGCATCCGAGCGA 868806 || |||||| | ||| || | ||||| ||||||||||| || || ||||| Sbjct 116 CATCTCCATGAAGTCGAAGGGCT---GCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGA 172 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 | | ||||| ||||| ||||| |||||||||||||| |||| || | ||||||||||| Sbjct 173 CACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCC 232 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 ||| ||| ||||||||||| |||| | |||||| |||||| | || || || || Sbjct 233 GATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCAC 292 Query 868927 GATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCA 868982 |||||||| || | | || ||| || ||||| |||| | || |||| |||| Sbjct 293 GATGATCT-CCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCA 351 Query 868983 GGCAGGCAAAGTCGCAGTGCA 869003 |||| || ||||| ||||| Sbjct 352 GGCACGCGAAGTCCGTGTGCA 372 Score = 134 bits (148), Expect = 2e-25 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || | |||||||||||| || || | | |||| | ||| | Sbjct 652 CCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCT 711 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || ||||||| || || ||||||||| |||||| ||||||||| |||||| Sbjct 712 TCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGA 771 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||| ||||| ||||| | ||| | |||||| Sbjct 772 AGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCT 831 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 |||| || ||||| | |||||| |||||||| || ||| || |||| Sbjct 832 TCATGTCATTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGT 891 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGC 869930 || | ||| | | ||||| ||| ||||| || || ||||| ||||| || Sbjct 892 ACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGGAACGGGTTCTCCT 951 Query 869931 GCAACAGGGGTTCG 869944 || ||| || ||| Sbjct 952 GCTGCAGCGGCTCG 965 Score = 132 bits (146), Expect = 6e-25 Identities = 200/285 (70%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| |||||||| || | | ||| ||||| || ||||||||| Sbjct 375 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 434 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || | |||||||| |||||||| |||||||| || || ||||||||| Sbjct 435 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 494 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| |||||||| |||| | || || || ||||||| || |||||| Sbjct 495 CCGATCAGCCGCTCCTGAAAGCTCGCGCCGC------TGCCGATCCACCGCACCGCCCAC 548 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | |||| | ||| | ||| ||| | | || | ||| || Sbjct 549 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 608 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||| ||| || ||||| | ||| | ||| || |||||| Sbjct 609 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCC 653 >seq1113 Length=1237 Score = 179 bits (198), Expect = 5e-39 Identities = 235/321 (73%), Gaps = 11/321 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| |||||||||||| | |||||| ||||| |||||||||| |||||||| Sbjct 320 CGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGAT 379 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC---TTGTAGTGCTTTTCGCATCCGAGCGA 868806 || |||||| | ||| || | ||||| ||||||||||| || || ||||| Sbjct 380 CATCTCCATGAAGTCGAAGGGCT---GCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGA 436 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 | | ||||| ||||| ||||| |||||||||||||| |||| || | ||||||||||| Sbjct 437 CACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCC 496 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 ||| ||| ||||||||||| |||| | |||||| |||||| | || || || || Sbjct 497 GATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCAC 556 Query 868927 GATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCA 868982 |||||||| || | | || ||| || ||||| |||| | || |||| |||| Sbjct 557 GATGATCT-CCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCA 615 Query 868983 GGCAGGCAAAGTCGCAGTGCA 869003 |||| || ||||| ||||| Sbjct 616 GGCACGCGAAGTCCGTGTGCA 636 Score = 134 bits (148), Expect = 2e-25 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || | |||||||||||| || || | | |||| | ||| | Sbjct 916 CCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCT 975 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || ||||||| || || ||||||||| |||||| ||||||||| |||||| Sbjct 976 TCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGA 1035 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||| ||||| ||||| | ||| | |||||| Sbjct 1036 AGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCT 1095 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 |||| || ||||| | |||||| |||||||| || ||| || |||| Sbjct 1096 TCATGTCATTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGT 1155 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGC 869930 || | ||| | | ||||| ||| ||||| || || ||||| ||||| || Sbjct 1156 ACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGGAACGGGTTCTCCT 1215 Query 869931 GCAACAGGGGTTCG 869944 || ||| || ||| Sbjct 1216 GCTGCAGCGGCTCG 1229 Score = 132 bits (146), Expect = 6e-25 Identities = 200/285 (70%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| |||||||| || | | ||| ||||| || ||||||||| Sbjct 639 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 698 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || | |||||||| |||||||| |||||||| || || ||||||||| Sbjct 699 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 758 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| |||||||| |||| | || || || ||||||| || |||||| Sbjct 759 CCGATCAGCCGCTCCTGAAAGCTCGCGCCGC------TGCCGATCCACCGCACCGCCCAC 812 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | |||| | ||| | ||| ||| | | || | ||| || Sbjct 813 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 872 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||| ||| || ||||| | ||| | ||| || |||||| Sbjct 873 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCC 917 >seq910 Length=2952 Score = 179 bits (198), Expect = 5e-39 Identities = 235/321 (73%), Gaps = 11/321 (3%) Strand=Plus/Plus Query 868690 CGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGAT 868749 |||||| |||||||||||| | |||||| ||||| |||||||||| |||||||| Sbjct 2035 CGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGAT 2094 Query 868750 CAACTCCATCCACGGGAACGGGTTGGGCGTC---TTGTAGTGCTTTTCGCATCCGAGCGA 868806 || |||||| | ||| || | ||||| ||||||||||| || || ||||| Sbjct 2095 CATCTCCATGAAGTCGAAGGGCT---GCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGA 2151 Query 868807 CGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC 868866 | | ||||| ||||| ||||| |||||||||||||| |||| || | ||||||||||| Sbjct 2152 CACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCC 2211 Query 868867 GATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGAC 868926 ||| ||| ||||||||||| |||| | |||||| |||||| | || || || || Sbjct 2212 GATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCAC 2271 Query 868927 GATGATCTGCCTGGGCACG-TCGGCCGAGGGCTTG---TTGACGAGCATCGTGTAGAGCA 868982 |||||||| || | | || ||| || ||||| |||| | || |||| |||| Sbjct 2272 GATGATCT-CCAGCACGCGCTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCA 2330 Query 868983 GGCAGGCAAAGTCGCAGTGCA 869003 |||| || ||||| ||||| Sbjct 2331 GGCACGCGAAGTCCGTGTGCA 2351 Score = 134 bits (148), Expect = 2e-25 Identities = 218/314 (69%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| |||||||| || | |||||||||||| || || | | |||| | ||| | Sbjct 2631 CCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCT 2690 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 || || ||||||| || || ||||||||| |||||| ||||||||| |||||| Sbjct 2691 TCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGA 2750 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || ||||||||||| ||||| ||||| ||||| | ||| | |||||| Sbjct 2751 AGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCT 2810 Query 869811 CGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 |||| || ||||| | |||||| |||||||| || ||| || |||| Sbjct 2811 TCATGTCATTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGT 2870 Query 869871 ACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGC 869930 || | ||| | | ||||| ||| ||||| || || ||||| ||||| || Sbjct 2871 ACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGGAACGGGTTCTCCT 2930 Query 869931 GCAACAGGGGTTCG 869944 || ||| || ||| Sbjct 2931 GCTGCAGCGGCTCG 2944 Score = 132 bits (146), Expect = 6e-25 Identities = 200/285 (70%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || |||||||| ||||| |||||||| || | | ||| ||||| || ||||||||| Sbjct 2354 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 2413 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || ||||| || | |||||||| |||||||| |||||||| || || ||||||||| Sbjct 2414 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 2473 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||||| |||||||| |||| | || || || ||||||| || |||||| Sbjct 2474 CCGATCAGCCGCTCCTGAAAGCTCGCGCCGC------TGCCGATCCACCGCACCGCCCAC 2527 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTCG 869419 || ||||| ||| | |||| | ||| | ||| ||| | | || | ||| || Sbjct 2528 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 2587 Query 869420 GCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||| ||| || ||||| | ||| | ||| || |||||| Sbjct 2588 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCC 2632 >seq1890 Length=30326 Score = 147 bits (162), Expect = 3e-29 Identities = 193/265 (73%), Gaps = 2/265 (1%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| |||||||| || |||| ||| ||||| || |||||||| || | || || || Sbjct 24324 CTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACACGCAGCATGGGTACCAAACCATTTGA 24383 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCG-GCAAAGC 1630183 | ||| || ||||| || | |||| |||||||| ||| | |||||| | ||||| | Sbjct 24384 CGTGCCATTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGAATGTTGTGCACATGCAAA-C 24442 Query 1630184 CGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCT 1630243 | ||||||||||| | |||| ||||| || |||| || || || |||||||| || | Sbjct 24443 CAATGCCGCCGGCAGCCTTGCTGATGACGGCACACTCCTTCAGTGTATCGTAGATACCAT 24502 Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303 | || ||| ||||| | ||||| ||||| || | ||||| | || ||||| Sbjct 24503 CAATACTGTCTTCCTTCGACGCAACGAGGAAGCAAGAGCTCATCTGCGGCTTCGGCGTGC 24562 Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGC 1630328 | ||||||||||| || || || || Sbjct 24563 CAGCGTTGAAGAGGGTCGGGGTAGC 24587 Score = 123 bits (136), Expect = 3e-22 Identities = 356/542 (66%), Gaps = 12/542 (2%) Strand=Plus/Plus Query 1626985 TCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGTC 1627044 || ||||| |||| || || |||||||| | | |||||||||| ||||||| || ||| Sbjct 22921 TCCACGGTGAACTTAATCGCATCGGCGGCCGCCTTGGTGCGCAGGTAGTACACACCCGTC 22980 Query 1627045 TTGAGGCCGCGGCGCC-ACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCG-T 1627102 ||||| || || | || ||| |||| | ||||||||||||| | | | || | | | Sbjct 22981 TTGAGCCC-CGACTCCCACGTGTAGAAGAGCATCGACGTGATTTGGCCAGAGGTGGGGCT 23039 Query 1627103 CGGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCA 1627162 | || | |||| || ||||||||| ||||||| || | | || ||| |||| Sbjct 23040 CTGCAAAA-ACAGATTCAGCGACTGGGATTGGTCGATGTACTGGCCACGGTCGCGGGCCA 23098 Query 1627163 TGTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCGG 1627222 |||| || || | || | ||||||||| || | ||| |||| |||||| Sbjct 23099 TGTCAATCAGCTTGCGCTGCGGGATCTCCCACACCGTACGGTAGAGCTCCTTCAGGTCGT 23158 Query 1627223 GCGGCACCTCGTCG-TCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCG 1627281 ||| | |||| ||| || | | ||||||| | || || | || | Sbjct 23159 CCGGAATACCGTCAATCGTCA-------GGATGGAGCCGTTGAAGGTGATGATCTCGTTG 23211 Query 1627282 CGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACC 1627341 || | | |||||||||| ||| || ||| | | || |||| ||| || Sbjct 23212 CGCATGGTTTCATTCCACAGGCCTCGCTTGATGAGGTCCATCACAAGGTACTTGTTCACG 23271 Query 1627342 ACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCAC 1627401 || | || ||||| ||||| ||||| ||||||||| ||||| | |||| | Sbjct 23272 ACCGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGGCTCGAAG 23331 Query 1627402 GCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGC 1627461 ||| ||||||| || |||||||| || | || |||||||| |||| || || ||| Sbjct 23332 CACTCATTGTTGCCAAGAATCTGCGAGGTGGACGCAGTGGGCATCGGCGCAACCAGCAGC 23391 Query 1627462 GAGTTGCGCAGGCCGTGCTGTCGAACTAGCGCGCGCAGCGCGTCCCAGTCCCAGCGGCCG 1627521 ||||| |||| ||| ||| || | | || ||||||||||||||||||| Sbjct 23392 GAGTTCCGCATACCGACCTGCACCACCTTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCG 23451 Query 1627522 CT 1627523 || Sbjct 23452 CT 23453 Score = 105 bits (116), Expect = 8e-17 Identities = 315/492 (64%), Gaps = 2/492 (0%) Strand=Plus/Plus Query 1628110 GGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTCCGTGGGCGACGAAAACTGGACG 1628169 |||||||| | | || |||||||| |||| ||| ||||| | ||| ||| Sbjct 23833 GGCAGGGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTCTGGCGAGGTGTACTCGACA 23892 Query 1628170 ATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGG 1628229 ||||| ||||||||||| | || | | || || ||||||| |||||| | | | Sbjct 23893 ATCTCCGTGCACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTTGACTTACTG 23952 Query 1628230 TTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGATG 1628289 ||| || ||||||| || ||| | ||| |||| ||||||||||||| | ||| |||| Sbjct 23953 TTGCACGCATCCTTGTAAAGGATGAACGGCACGCCTGTCTCGATCTGCGACTCGAGGATG 24012 Query 1628290 GCCGACCAGATCTGGCGCGCGGGCA-CGACAGTCCGCGCGCGGCCCTNNNNNNNNNNNNN 1628348 || |||| | || |||| | | || | | | | ||||||||| Sbjct 24013 GCGAACCACACCTCCTGCGCCTGAATCGTCTGCACAC-CGCGGCCCTCCGCCTCGTAACG 24071 Query 1628349 NNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGG 1628408 || || || |||||||||| ||| || || || | ||| Sbjct 24072 CTCATACAGACGCTCGAACTCCTCGCCGTAGCAGTCGCTGAGACCTGGACAGGTGCTCGG 24131 Query 1628409 ACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGTCCA 1628468 | |||| ||| | || | | | | | || ||| |||||||| |||| Sbjct 24132 GTCCATCAGCGTCCACTTCCCCTCCGACTTCACACGCTTCATGAAGAGGTCGGGAATCCA 24191 Query 1628469 CAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTC 1628528 ||| ||||| || |||||||| || || | || ||||||||| ||| || || Sbjct 24192 CAGCGCGTAGAACAGGTCGCGTGCACGCTGGTCGTCCTTGCCGGTGTTACGCTTCAGCAG 24251 Query 1628529 GAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCG 1628588 || | ||| |||||||||||||||||||| || || ||||||||| || ||||| Sbjct 24252 CAGAAACCCGAAGATGTCGGCGTGCCACGGCTCAAGATACACGGCAAAGGCACCTTTGCG 24311 Query 1628589 CTTGCCGCCGCC 1628600 ||| ||||| || Sbjct 24312 CTTACCGCCACC 24323 >seq2639 Length=21496 Score = 93.3 bits (102), Expect = 5e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 507103 GGAGCGGTTCAAGGGCAAGGAGGGTAGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAA 507162 |||||| | ||||||||| | || | | |||||||| | ||||||||||| || | Sbjct 9539 GGAGCGCCTGAAGGGCAAGTACGGCCGCCTGCGCGGCAACTTAATGGGCAAGCGTGTTGA 9598 Query 507163 CTTTACCGCGCGCGCCGTCATCAGCCCCGACCCCGAGATCGACATTGACGAGGTGGGCGT 507222 ||| | ||||| | || |||| | |||||| | || ||| | |||||||| || || Sbjct 9599 CTTCTCTGCGCGTACGGTGATCACCGGTGACCCCAACATTGACGTCGACGAGGTCGGTGT 9658 Query 507223 GCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGA 507266 ||||| ||| || |||||| || ||||||||||| |||| Sbjct 9659 GCCCTTCTCTGTCGCCATGACGCTGACATTTCCCGAGCGGGTGA 9702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106865678411561