Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq1164 86.0 2e-12 >seq1164 Length=56265 Score = 86.0 bits (94), Expect = 2e-12 Identities = 205/309 (66%), Gaps = 6/309 (2%) Strand=Plus/Minus Query 37203 GGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAA 37262 |||||| || | | | || || ||||| ||||| ||| | ||||||||| || || Sbjct 7719 GGGCGAGCTCGCCGTGATTCCCGGCTCCATGGGAGCGCGCAGCTACATCGTTCGTGGAAA 7660 Query 37263 GGGAAATTCCGAATCG---TTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCG 37319 || | ||| || | |||||| || |||||| || || || ||||| Sbjct 7659 AGGTAG---CGAGGCGAGCTACTGCTCCTGTTCCCACGGCGCAGGGCGGCGCTACAGCCG 7603 Query 37320 GGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGA 37379 | || ||| || || ||||| |||| |||||| |||| ||||| || || || Sbjct 7602 TGGTGAGGCACGCCGTCGCTTCACCGTCGCGGATCACGAGGTCGCCACTTCGGGGATTGA 7543 Query 37380 GTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGC 37439 ||||||||| || | | ||| | |||||||| || || || |||||||||||||| | Sbjct 7542 GTGCCGCAAGGACGGCAGCGTGCTGGACGAGACCCCCGCCGCGTACAAGGACATCGACTC 7483 Query 37440 GGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTG 37499 ||||| | || || | |||||| || | ||| ||||| || ||| | || Sbjct 7482 CGTCATCGAGGCTCAGCGGGACCTGGTCGAGGTGGTGGCAGTACTGCGGCAGGTCTTGTG 7423 Query 37500 CGTGAAGGG 37508 ||||| || Sbjct 7422 TGTGAAAGG 7414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139277687257996