Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2637 197 2e-45 >seq2637 Length=10591 Score = 197 bits (218), Expect = 2e-45 Identities = 416/616 (68%), Gaps = 22/616 (4%) Strand=Plus/Plus Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966 |||||| |||||| | |||||||||| || ||||||||||||||| || |||||||| Sbjct 8743 CAGCTGCTCTTTCAGCGCCTCCACGTGGGTGCTGTAGACGTGCGCGTCGCCGAGGGTGTG 8802 Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA 147026 ||| | || ||||| ||||| ||| | | ||| | || || | |||||||| Sbjct 8803 CACCAGCTCACCCGGACGCAGGCCAGTCGCCTTGGCGATCAAAATCGTCAAGAGCGAGTA 8862 Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||| || || || || |||||||| | || | ||| |||||| ||| Sbjct 8863 CGACGCGATGTTGAACGGCACGCCAAGACCCATGTCGCATGAGCGCTGATACAGCATGCA 8922 Query 147087 CGAGAGCTCC-----CCGT-CGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 || || ||| | || | ||||||||||| | || | |||||| ||||| || Sbjct 8923 GGACAGTTCCTTTGTCTGTGTGTTTACGTAAAACTGACCAAGCAGGTGGCATGGCGGAAG 8982 Query 147141 CGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||||| | |||| | ||||||||| |||| || | |||||| | | | || Sbjct 8983 TGCCATCTTGTGCAGAGCACAGGGGTTCCACGCCGTGAAAAGCAGCCGACGGTCATTCGG 9042 Query 147201 GTTCCTCTTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTA 147257 |||| |||| | |||| |||| | | | | ||| |||||||| | ||| |||| Sbjct 9043 GTTCGTCTTGAGCGTCTCCACGAT---CTGCTTGATCTGATCCACGCCTTCGCCGTCGTA 9099 Query 147258 GTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 ||| | | || || |||| || || ||||| | |||||||||||||||||| || Sbjct 9100 GTTCGCGTCAAAGCCCTTGTACTCAGCACCGAAGTGGCGCCACTGGAAGCCGTACACCGG 9159 Query 147318 CCCCAGG----TCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGG 147372 || ||| || || | |||| || ||||||| | | || ||||| || Sbjct 9160 ACCGAGGTCCATCACCTTGTTTTCCGT-----CAGCCCGCGGCTGTCAAGGAACTCACGG 9214 Query 147373 GACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAG 147432 || || | ||||||||||| | ||||| | | ||| || | | ||| | Sbjct 9215 GAACCATTACCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCATTCGTCTCG 9274 Query 147433 CCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTC 147492 ||||| | ||||| | |||||||| | || || | ||| ||||||| ||| || ||| Sbjct 9275 CCCCGCAGAAACCAAATTAGCTCCTCGCACACGCCACGCCAGAAGACCCGCTTCGTCGTC 9334 Query 147493 AGCAGGGGGAACTGGT 147508 ||||| || | ||||| Sbjct 9335 AGCAGCGGCAGCTGGT 9350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583463690431200