Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1185 105 6e-18 >seq1185 Length=29681 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || |||||| ||| || || || || || || || || || || | Sbjct 29465 GCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCC 29524 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 || || ||||| ||||| || || || || ||||||||||| | || | || ||| || Sbjct 29525 CTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 29584 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| ||| || | || | | ||| ||||||| |||||| |||| || ||| Sbjct 29585 GTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGAT 29644 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || |||||||| || || ||||| ||||| Sbjct 29645 CGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 29680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429528151455029