Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1185 176 9e-39 seq990 95.1 3e-14 seq623 93.3 9e-14 seq1439 91.5 3e-13 seq1438 91.5 3e-13 seq1113 91.5 3e-13 seq910 91.5 3e-13 >seq1185 Length=29681 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || || || || | |||| || || |||||||||||||| || Sbjct 29454 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 29513 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||| ||||| || || || ||||| ||||||| || || ||||| ||| Sbjct 29514 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 29573 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || ||| | ||||| ||||| || || || Sbjct 29574 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 29633 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || | ||||||||| || |||| ||||| ||||| |||||||| Sbjct 29634 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 29680 >seq990 Length=33815 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 273828 GAACCAAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGA 273887 || || ||||||||||| |||| ||| ||| |||||||||| ||| | | | ||| Sbjct 23210 GAGCCGAACTGACCCTCCGGCACGAGCAGGTTAATGTTGTTGCCGCCGGTGAAGTTCTGT 23269 Query 273888 GCCATATTCACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGC 273937 ||||| |||||||| ||| ||||||| || |||||||||||||| |||| Sbjct 23270 GCCATCTTCACGATCGTCTCCTGAAGAGACACCTCGCCGTGGTGGAAGGC 23319 >seq623 Length=835 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| ||||| || ||||| ||| Sbjct 834 CCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCGACCTCG 775 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||||||| || |||| ||||| ||||| |||||||| Sbjct 774 AGCGCGATCGTCTTGCCTGTCAGCGTCTTCACGAAGATCTGCAT 731 >seq1439 Length=11893 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 ||||| || |||||||| | || || || ||||||||||| || || || ||| | Sbjct 268 GAGTTTATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCG 209 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| ||| ||||| || Sbjct 208 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGAAGCACTAC 149 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | | ||||||| || |||||| | || || || ||||| || || |||||| Sbjct 148 AACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 89 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||| ||| || |||| || || ||||| Sbjct 88 TTCGAGAAGAAGGTGGGCGAGTACCAGAAGGC 57 >seq1438 Length=1320 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 ||||| || |||||||| | || || || ||||||||||| || || || ||| | Sbjct 268 GAGTTTATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCG 209 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| ||| ||||| || Sbjct 208 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGAAGCACTAC 149 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | | ||||||| || |||||| | || || || ||||| || || |||||| Sbjct 148 AACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 89 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||| ||| || |||| || || ||||| Sbjct 88 TTCGAGAAGAAGGTGGGCGAGTACCAGAAGGC 57 >seq1113 Length=1237 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 ||||| || |||||||| | || || || ||||||||||| || || || ||| | Sbjct 532 GAGTTTATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCG 473 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| ||| ||||| || Sbjct 472 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGAAGCACTAC 413 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | | ||||||| || |||||| | || || || ||||| || || |||||| Sbjct 412 AACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 353 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||| ||| || |||| || || ||||| Sbjct 352 TTCGAGAAGAAGGTGGGCGAGTACCAGAAGGC 321 >seq910 Length=2952 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/212 (70%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 230193 GAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGG 230252 ||||| || |||||||| | || || || ||||||||||| || || || ||| | Sbjct 2247 GAGTTTATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCG 2188 Query 230253 CAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTAT 230312 || || ||||| ||||| || || || | | ||| |||| ||| ||||| || Sbjct 2187 CAGTACATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGAAGCACTAC 2128 Query 230313 AACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTC 230372 ||| | | | ||||||| || |||||| | || || || ||||| || || |||||| Sbjct 2127 AACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 2068 Query 230373 TTCGAAAAGCGTGTCAGCGATTATCA-AAGGC 230403 ||||| ||| || |||| || || ||||| Sbjct 2067 TTCGAGAAGAAGGTGGGCGAGTACCAGAAGGC 2036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046694499983782