Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216585.1_202017-07-11] 3,333 sequences; 31,522,544 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1185 187 2e-42 >seq1185 Length=29681 Score = 187 bits (206), Expect = 2e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| || || | ||| || ||||||||| ||||||||| ||||| ||||| | | Sbjct 29454 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 29513 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| ||||||||||| ||||||| || Sbjct 29514 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGG 29573 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACC 41815 | || |||||||||| ||| || ||||| | | |||||||||| ||||||| Sbjct 29574 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACC 29633 Query 41816 TCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| || ||||| || || ||||||||||| ||||| ||||||||| Sbjct 29634 TCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCATG 29681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462284739259600