Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq3710 161 1e-34 >seq3710 Length=2726 Score = 161 bits (178), Expect = 1e-34 Identities = 411/618 (67%), Gaps = 23/618 (4%) Strand=Plus/Minus Query 145681 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC- 145739 ||||| | |||||||||| || ||||||||||||||| || ||| ||| | | || Sbjct 2003 TTCAGCGCCTCCACGTGGGTGCTGTAGACGTGCGCGTCGCCGAGGGTGTGCACCAGCTCA 1944 Query 145740 CCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTAT 145799 ||||| | | ||||| || | ||||| || |||| || ||||| || || Sbjct 1943 CCCGGACGC-AGGCCAGTCGCCTTGGCGATCAAAATCGTCAAGAGCGAGTACGACGCGAT 1885 Query 145800 GTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC 145859 |||||| ||||| || || |||||||| | |||||||| |||||| |||||| || || Sbjct 1884 GTTGAACGGCACGCCAAGACCCATGTCGCATGAGCGCTGATACAGCATGCAGGACAGTTC 1825 Query 145860 C-CCGCCCG-----CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGC 145913 | | | | ||||| ||||| | || |||||||| ||||| || ||||| Sbjct 1824 CTTTGTCTGTGTGTTTACGTAAAACTGACCAAGCAGGTGGCATGGCGGAAGTGCCATCTT 1765 Query 145914 GGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTT 145973 | |||| | |||||||| || |||| | |||| | | | |||||| |||| Sbjct 1764 GTGCAGAGCACAGGGGTTCCACGCCGTGAAAAGCAGCCGACGGTCATTCGGGTTCGTCTT 1705 Query 145974 GA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTT 146030 || ||||| | ||| | | ||| ||| |||||||| | || ||| | | | Sbjct 1704 GAGCGTCTCCACGATC---TGCTTGATCTGATCCACGCCTTCGCCGTCGTAGTTCGCGTC 1648 Query 146031 GGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTC 146090 || || |||| | || |||||||| | ||||||||| ||||| || || || ||||| Sbjct 1647 AAAGCCCTTGTACTCAGCACCGAAGTGGCGCCACTGGAAGCCGTACACCGGACCGAGGTC 1588 Query 146091 CCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGC 146147 | | || ||| | ||||||| | | | ||||| || ||||| || || | Sbjct 1587 C---ATCACCTTGTTTTCGGTCAGCCCGCGGCTGTCAAGGAACTCACGGGAACCATTACC 1531 Query 146148 GTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAA 146207 ||||||||| | | | || | | | ||| | | | ||| |||| | || Sbjct 1530 GTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCATTCGTCTCGCCCCGCAGAAA 1471 Query 146208 CCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 ||| | ||||| ||| || || | ||||||||||| ||| || |||||||| || | Sbjct 1470 CCAAATTAGCTCCTCGCACACGCCACGCCAGAAGACCCGCTTCGTCGTCAGCAGCGGCAG 1411 Query 146268 CTG---GCCCCGCAGGGA 146282 ||| | |||| ||||| Sbjct 1410 CTGGTTGTCCCGAAGGGA 1393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590032131186240