Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq5764 419 2e-112 seq2242 419 2e-112 seq1335 419 2e-112 seq1327 419 2e-112 seq5082 152 5e-32 >seq5764 Length=2049 Score = 419 bits (464), Expect = 2e-112 Identities = 599/828 (72%), Gaps = 18/828 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||| || |||||||| ||| | |||| | ||||| || |||| ||| Sbjct 1086 GAGCCGCTGCAGCAGGAGAACCCGTTCCGCTACGTGCTGTTCCCGATCGTGTACCACGAC 1145 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| | |||||| | |||||| Sbjct 1146 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACCTG 1205 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| |||| || ||||||||| | |||||||| ||||| || |||||||||||| Sbjct 1206 GGCAACGACATGAAGGACTGGGAGAGGCTGAACGACGGGGAGCGGCACTTCATCAAGCAC 1265 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||| || || ||||||| ||||||||| ||||| | |||||| || | |||| ||| Sbjct 1266 GTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTCGCGCAGCGCTTC 1325 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | || || ||| ||||| | |||||||| ||||||||||| ||| | ||||| Sbjct 1326 -ATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCCAGTTGATGATGGA 1384 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT-GCGCTCTTCGGAGG 116933 |||| | |||||||| | ||| ||| || | ||||||||| | || | | | || Sbjct 1385 GAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGC-GCGG 1443 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||||| || || || |||| ||| ||||||| |||||| || | ||||||| |||| Sbjct 1444 AGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGT 1503 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 ||||| |||| ||||||| | || | | | || ||| | ||||| ||| | | ||| | Sbjct 1504 GGGCGGTGCGGTGGATCGGCAGCGGCGCG--AGCTTTCAG-GAGCGGCTGATCGGCTTTG 1560 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| ||||||| ||||| ||| ||| | || ||||| ||||| | Sbjct 1561 CCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGC 1620 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || ||||| ||| |||| |||||||||||||| ||||| | |||||||| |||| Sbjct 1621 GCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGC 1680 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCGAGCGCG-GCG 117229 | ||||| || || |||||| ||| ||| | ||| | | | |||| | | Sbjct 1681 ACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCA-CAAGCTGCCGCGCGAG 1739 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||||| ||||||| || |||||||| |||||||| || || ||| ||| Sbjct 1740 CGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTTTATCTGCGACGCG 1799 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 ||||||||||| ||| | || | || ||| | | ||||||||| |||||||||||||| Sbjct 1800 CTGCCGGTGCGGCTGATCGGCATGAA-CGCGGAGCTGATGTCGCAGTACATCGAGTTCGT 1858 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGC--GCCAAGCACTACAAC 117394 ||| ||| ||||||| | ||||| ||| | |||||||||||| Sbjct 1859 CGCGGACCGGCTGCTTGTGTCGCTGG--GGCTGGAGAAGCACTACAAC 1904 >seq2242 Length=2422 Score = 419 bits (464), Expect = 2e-112 Identities = 599/828 (72%), Gaps = 18/828 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||| || |||||||| ||| | |||| | ||||| || |||| ||| Sbjct 10 GAGCCGCTGCAGCAGGAGAACCCGTTCCGCTACGTGCTGTTCCCGATCGTGTACCACGAC 69 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| | |||||| | |||||| Sbjct 70 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACCTG 129 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| |||| || ||||||||| | |||||||| ||||| || |||||||||||| Sbjct 130 GGCAACGACATGAAGGACTGGGAGAGGCTGAACGACGGGGAGCGGCACTTCATCAAGCAC 189 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||| || || ||||||| ||||||||| ||||| | |||||| || | |||| ||| Sbjct 190 GTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTCGCGCAGCGCTTC 249 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | || || ||| ||||| | |||||||| ||||||||||| ||| | ||||| Sbjct 250 -ATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCCAGTTGATGATGGA 308 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT-GCGCTCTTCGGAGG 116933 |||| | |||||||| | ||| ||| || | ||||||||| | || | | | || Sbjct 309 GAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGC-GCGG 367 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||||| || || || |||| ||| ||||||| |||||| || | ||||||| |||| Sbjct 368 AGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGT 427 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 ||||| |||| ||||||| | || | | | || ||| | ||||| ||| | | ||| | Sbjct 428 GGGCGGTGCGGTGGATCGGCAGCGGCGCG--AGCTTTCAG-GAGCGGCTGATCGGCTTTG 484 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| ||||||| ||||| ||| ||| | || ||||| ||||| | Sbjct 485 CCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGC 544 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || ||||| ||| |||| |||||||||||||| ||||| | |||||||| |||| Sbjct 545 GCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGC 604 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCGAGCGCG-GCG 117229 | ||||| || || |||||| ||| ||| | ||| | | | |||| | | Sbjct 605 ACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCA-CAAGCTGCCGCGCGAG 663 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||||| ||||||| || |||||||| |||||||| || || ||| ||| Sbjct 664 CGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTTTATCTGCGACGCG 723 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 ||||||||||| ||| | || | || ||| | | ||||||||| |||||||||||||| Sbjct 724 CTGCCGGTGCGGCTGATCGGCATGAA-CGCGGAGCTGATGTCGCAGTACATCGAGTTCGT 782 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGC--GCCAAGCACTACAAC 117394 ||| ||| ||||||| | ||||| ||| | |||||||||||| Sbjct 783 CGCGGACCGGCTGCTTGTGTCGCTGG--GGCTGGAGAAGCACTACAAC 828 >seq1335 Length=2956 Score = 419 bits (464), Expect = 2e-112 Identities = 599/828 (72%), Gaps = 18/828 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||| || |||||||| ||| | |||| | ||||| || |||| ||| Sbjct 2947 GAGCCGCTGCAGCAGGAGAACCCGTTCCGCTACGTGCTGTTCCCGATCGTGTACCACGAC 2888 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| | |||||| | |||||| Sbjct 2887 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACCTG 2828 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| |||| || ||||||||| | |||||||| ||||| || |||||||||||| Sbjct 2827 GGCAACGACATGAAGGACTGGGAGAGGCTGAACGACGGGGAGCGGCACTTCATCAAGCAC 2768 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||| || || ||||||| ||||||||| ||||| | |||||| || | |||| ||| Sbjct 2767 GTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTCGCGCAGCGCTTC 2708 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | || || ||| ||||| | |||||||| ||||||||||| ||| | ||||| Sbjct 2707 A-TGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCCAGTTGATGATGGA 2649 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT-GCGCTCTTCGGAGG 116933 |||| | |||||||| | ||| ||| || | ||||||||| | || | | | || Sbjct 2648 GAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGC-GCGG 2590 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||||| || || || |||| ||| ||||||| |||||| || | ||||||| |||| Sbjct 2589 AGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGT 2530 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 ||||| |||| ||||||| | || | | | || ||| | ||||| ||| | | ||| | Sbjct 2529 GGGCGGTGCGGTGGATCGGCAGCGGCGCG--AGCTTTCAG-GAGCGGCTGATCGGCTTTG 2473 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| ||||||| ||||| ||| ||| | || ||||| ||||| | Sbjct 2472 CCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGC 2413 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || ||||| ||| |||| |||||||||||||| ||||| | |||||||| |||| Sbjct 2412 GCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGC 2353 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCGAGCGCG-GCG 117229 | ||||| || || |||||| ||| ||| | ||| | | | |||| | | Sbjct 2352 ACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCA-CAAGCTGCCGCGCGAG 2294 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||||| ||||||| || |||||||| |||||||| || || ||| ||| Sbjct 2293 CGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTTTATCTGCGACGCG 2234 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 ||||||||||| ||| | || | || ||| | | ||||||||| |||||||||||||| Sbjct 2233 CTGCCGGTGCGGCTGATCGGCATGAA-CGCGGAGCTGATGTCGCAGTACATCGAGTTCGT 2175 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGC--GCCAAGCACTACAAC 117394 ||| ||| ||||||| | ||||| ||| | |||||||||||| Sbjct 2174 CGCGGACCGGCTGCTTGTGTCGCTGG--GGCTGGAGAAGCACTACAAC 2129 >seq1327 Length=1320 Score = 419 bits (464), Expect = 2e-112 Identities = 599/828 (72%), Gaps = 18/828 (2%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||| || |||||||| ||| | |||| | ||||| || |||| ||| Sbjct 357 GAGCCGCTGCAGCAGGAGAACCCGTTCCGCTACGTGCTGTTCCCGATCGTGTACCACGAC 416 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| | |||||| | |||||| Sbjct 417 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACCTG 476 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| |||| || ||||||||| | |||||||| ||||| || |||||||||||| Sbjct 477 GGCAACGACATGAAGGACTGGGAGAGGCTGAACGACGGGGAGCGGCACTTCATCAAGCAC 536 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 ||||| || || ||||||| ||||||||| ||||| | |||||| || | |||| ||| Sbjct 537 GTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTCGCGCAGCGCTTC 596 Query 116816 GCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | || || ||| ||||| | |||||||| ||||||||||| ||| | ||||| Sbjct 597 -ATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCCAGTTGATGATGGA 655 Query 116875 GAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT-GCGCTCTTCGGAGG 116933 |||| | |||||||| | ||| ||| || | ||||||||| | || | | | || Sbjct 656 GAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGC-GCGG 714 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||||||| || || || |||| ||| ||||||| |||||| || | ||||||| |||| Sbjct 715 AGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCGGAGT 774 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 ||||| |||| ||||||| | || | | | || ||| | ||||| ||| | | ||| | Sbjct 775 GGGCGGTGCGGTGGATCGGCAGCGGCGCG--AGCTTTCAG-GAGCGGCTGATCGGCTTTG 831 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| ||||||| ||||| ||| ||| | || ||||| ||||| | Sbjct 832 CCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGC 891 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 |||| || ||||| ||| |||| |||||||||||||| ||||| | |||||||| |||| Sbjct 892 GCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGC 951 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCGAGCGCG-GCG 117229 | ||||| || || |||||| ||| ||| | ||| | | | |||| | | Sbjct 952 ACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCA-CAAGCTGCCGCGCGAG 1010 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||||| ||||||| || |||||||| |||||||| || || ||| ||| Sbjct 1011 CGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTTTATCTGCGACGCG 1070 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGT 117348 ||||||||||| ||| | || | || ||| | | ||||||||| |||||||||||||| Sbjct 1071 CTGCCGGTGCGGCTGATCGGCATGAA-CGCGGAGCTGATGTCGCAGTACATCGAGTTCGT 1129 Query 117349 CGCCGACAGGCTGCTGCTCGAGCTGGTCGGC--GCCAAGCACTACAAC 117394 ||| ||| ||||||| | ||||| ||| | |||||||||||| Sbjct 1130 CGCGGACCGGCTGCTTGTGTCGCTGG--GGCTGGAGAAGCACTACAAC 1175 >seq5082 Length=27471 Score = 152 bits (168), Expect = 5e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| || ||||| || ||| | | || || || || | | Sbjct 27470 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 27411 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || || | ||||| ||||||||||| ||||||| Sbjct 27410 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 27352 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| |||||||| || | ||||| ||| |||||||| Sbjct 27351 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACAA 27292 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||||||||| || ||| ||||| || | || || Sbjct 27291 CATCCAGAAGGAGTCCACGCTGCACCTCGTGCTGCGCCTGCGCGGTGG 27244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515180197906560