Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq4147 266 3e-66 seq5764 246 3e-60 seq2242 246 3e-60 seq1335 246 3e-60 seq1327 246 3e-60 seq5082 93.3 4e-14 >seq4147 Length=10003 Score = 266 bits (294), Expect = 3e-66 Identities = 539/792 (68%), Gaps = 6/792 (1%) Strand=Plus/Minus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 |||||| ||||| || ||||| || ||| ||| ||| || |||||||| ||||| || Sbjct 6508 GGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTCTGGCGAGGTGTACTCGACAATCTC 6449 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 || || || || ||||| || ||||| | || ||||||| || | ||||| Sbjct 6448 CGTGCACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTAGACTTACTGTTGCA 6389 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 || ||||||||| || ||| ||||| ||| ||||||| ||||||||||| ||| || Sbjct 6388 CGCATCCTTGTAAAGGATGAACGGCACGCCTGTCTCGATCTGCGACTCGAGGATGGCGAA 6329 Query 23200 CCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 ||||| ||| || |||| |||| |||| | ||| || ||||||| | | Sbjct 6328 CCACACCTCCTGCGCCTGAA-TCGTCTGCACACCGCGGCCCTCCGCCTCGTAACGCTCAT 6270 Query 23259 ACA-ACGCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCC-GGGCGATTGCATCGGACA 23316 ||| |||| || || || | ||||| |||||| || || || | ||| |||| Sbjct 6269 ACAGACGC-TCGAACTCCTCGCCGTAGCAGTCGCTGAGACCTGGACAGGTGC-TCGGGTC 6212 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || ||||| | || | || || |||| || || || || ||||| || Sbjct 6211 CATCAGCGTCCACTTCCCCTCCGACTTCACACGCTTCATGAAGAGGTCGGGAATCCACAG 6152 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 ||||||||||| ||||| || ||| || || ||||||||||| |||| || Sbjct 6151 CGCGTAGAACAGGTCGCGTGCACGCTGGTCGTCCTTGCCGGTGTTACGCTTCAGCAGCAG 6092 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| | || | ||| || ||||||||||| || || |||||||| || || | ||| Sbjct 6091 AAACCCGAAGATGTCGGCGTGCCACGGCTCAAGATACACGGCAAAGGCACCTTTGCGCTT 6032 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 | ||| ||||| || ||||| ||||| ||||||||| | || | ||||| || || | Sbjct 6031 ACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACACGCAGCATGGGTACCAA 5972 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||| || |||| ||| ||| || | || | |||| |||||| || Sbjct 5971 ACCATTTGACGTGCCATTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGAATGTTGTGCAC 5912 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 || ||||| ||||| ||| | | || || | || || | ||||| || ||||| Sbjct 5911 ATGCAAACCAATGCCGCCGGCAGCCTTGCTGATGACGGCACACTCCTTCAGTGTATCGTA 5852 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || || || ||||| || || | ||| || | ||| || || ||| |||| || Sbjct 5851 GATACCATCAATACTGTCTTCCTTCGACGCAACGAGGAAGCAAGAGCTCATCTGCGGCTT 5792 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||||| | || ||| || |||||| | |||||||| ||| | || |||||||| || Sbjct 5791 CGGCGTGCCAGCGTTGAAGAGGGTCGGGGTAGCGTGCGTGAAGAAACCCTTCGACATCAG 5732 Query 23797 ATTGTACGTGTC 23808 | |||||| || Sbjct 5731 CTCGTACGTCTC 5720 Score = 163 bits (180), Expect = 3e-35 Identities = 511/782 (65%), Gaps = 21/782 (3%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 ||||| || |||| || || | ||||||| |||||||| || || |||| |||||| Sbjct 7425 TCCACGGTGAACTTAATCGCATCGGCGGCCGCCTTGGTGCGCAGGTAGTACACACCCGTC 7366 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 || || ||| || ||||| ||| || | |||||||| | || ||| | | || Sbjct 7365 TTGAGCCCCGACTCCCACGTGTAGAAGAGCATCGACGTGATTTGGCCAGAGGTGGGGCTC 7306 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || ||| ||| | |||||| || ||||| || || || ||| |||||| Sbjct 7305 TGCAAAAACAGATTCAGCGACTGGGATTGGTCGATGTACTGGCCACGGTCGCGGGCCATG 7246 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | |||| | ||| || || ||||| || || ||| || | | | | || | Sbjct 7245 TCAATCAGCTTGCGCTGCGGGATCTCCCACACCGTACGGTAGAGCTCCTTCAGGTCGTCC 7186 Query 22349 GGTATCGATTCGATCCTCTGGACGGACCCGTT-ATTGTGTATGATCAAATTTTTAATCGT 22407 || || || ||| || ||| ||| ||||| | ||| |||||| || || || Sbjct 7185 GGAATACCGTCAATCGTCAGGATGGAGCCGTTGAAGGTG-ATGATCTCGTTGCGCATGGT 7127 Query 22408 ATCGTTCCACAAACCGATGGC--GGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA 22465 || ||||||| || | || | | | || | || || | |||||| || | Sbjct 7126 TTCATTCCACAGGCC--TCGCTTGATGAGGTCCATCACAAGGTACTTGTTCACGACCGGG 7069 Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 ||||||||| || || ||||| ||| ||||| || ||||| || ||||| | ||| Sbjct 7068 AACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGGCTCGAAGCACTCA 7009 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 ||||| || || ||||| | ||| || || || ||||||||||| | ||| |||||||| Sbjct 7008 TTGTTGCCAAGAATCTGCGAGGTGGACGCAGTGGGCATCGGCGCAACCAGCAGCGAGTTC 6949 Query 22586 CTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCA-------CAGATC 22638 | || ||| || | || |||||| | ||||||||| | | || Sbjct 6948 CGCATACCGACCTGCACCACCTTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCGCTGTTC 6889 Query 22639 GGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCC 22698 || ||| | || | |||||| ||| |||| | | ||| | ||||| ||||| || Sbjct 6888 GGGCGGGG----GTTCTTCCACATGTCGAATTGTAGAATGCCCTGGCTCGCGGGGCTACC 6833 Query 22699 TTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC-TCGCCTCCAACGCGC 22757 | | | |||||||| || || | | || | || || | |||||||| ||| Sbjct 6832 CTTGAAGGTTTCGTAGGGGCCCTCCTCCTTTGCCATCTC-CATCGACGCCTCCACAGCGG 6774 Query 22758 CGTAATATATAGTCTCGAAGATTTTCTTGTTCA-ATTCGGCGGCGGCGACGCTTTCGTAC 22816 | | || || ||||||||||| | | ||||| ||| || || || |||| | || Sbjct 6773 CAAAGTAGATGGTCTCGAAGATCTCCGCGTTCACCTTCTGC-GCCTCGGCGCTCACAAAC 6715 Query 22817 GGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGG 22876 |||| ||| | || | |||||| ||||||| ||||| ||||| | |||| || ||| Sbjct 6714 GGCAGACGAAGCAGAATGAACGCATCCGCCAGCCCCTGCACGCCCACGCCGACGGGACGG 6655 Query 22877 TT 22878 || Sbjct 6654 TT 6653 >seq5764 Length=2049 Score = 246 bits (272), Expect = 3e-60 Identities = 520/762 (68%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || |||||| | ||||| ||||||| ||| || || || | |||||| | Sbjct 1254 TTCATCAAGCACGTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTC 1313 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| |||||||| | || ||||| || | Sbjct 1314 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCC 1371 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| ||| | || | || |||||| | | Sbjct 1372 AGTTGATGATGGAGAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCA 1431 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 ||||| || ||||| | | ||| | |||||||| | || || |||| | ||| Sbjct 1432 CGGACAGCGCGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGAT-CCCGTGCATCCAG 1490 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| |||| | || | ||| ||| || Sbjct 1491 AAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGCAGCGGCGCGAGCT--TTCAG-GAGCGG 1547 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATT 58033 || |||| || ||||| || ||||| || ||||| ||||| || |||| | | || Sbjct 1548 CTGATCGGCTTTGCCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCG-CGCTGTT 1606 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| ||| ||||||| ||||||||| |||| ||||| Sbjct 1607 CTGGCTGAAGAAGCGCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCG 1666 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 ||||||||| || || || || || |||||||| ||| |||| ||||| | || Sbjct 1667 CGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAA 1726 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| || ||| || ||||| ||||| |||||| Sbjct 1727 GCTGCCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTT 1786 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | || ||| || || |||||| || |||| |||||| || ||||||| |||| Sbjct 1787 TATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCGCAGTA 1846 Query 58271 CATTGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | |||||| || |||||| Sbjct 1847 CATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGA--AGCACTACAAC 1904 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 || | || || || || ||| | |||||||||| |||||||||| ||||| ||| Sbjct 1905 GTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTC 1964 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || || || || |||| || || || |||||||||||| Sbjct 1965 GAGAAGAAGGTGGGCGAGTACCAGAAGGCGGGCGTGATGAGC 2006 >seq2242 Length=2422 Score = 246 bits (272), Expect = 3e-60 Identities = 520/762 (68%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || |||||| | ||||| ||||||| ||| || || || | |||||| | Sbjct 178 TTCATCAAGCACGTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTC 237 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| |||||||| | || ||||| || | Sbjct 238 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCC 295 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| ||| | || | || |||||| | | Sbjct 296 AGTTGATGATGGAGAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCA 355 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 ||||| || ||||| | | ||| | |||||||| | || || |||| | ||| Sbjct 356 CGGACAGCGCGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGAT-CCCGTGCATCCAG 414 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| |||| | || | ||| ||| || Sbjct 415 AAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGCAGCGGCGCGAGCT--TTCAG-GAGCGG 471 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATT 58033 || |||| || ||||| || ||||| || ||||| ||||| || |||| | | || Sbjct 472 CTGATCGGCTTTGCCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCG-CGCTGTT 530 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| ||| ||||||| ||||||||| |||| ||||| Sbjct 531 CTGGCTGAAGAAGCGCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCG 590 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 ||||||||| || || || || || |||||||| ||| |||| ||||| | || Sbjct 591 CGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAA 650 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| || ||| || ||||| ||||| |||||| Sbjct 651 GCTGCCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTT 710 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | || ||| || || |||||| || |||| |||||| || ||||||| |||| Sbjct 711 TATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCGCAGTA 770 Query 58271 CATTGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | |||||| || |||||| Sbjct 771 CATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGA--AGCACTACAAC 828 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 || | || || || || ||| | |||||||||| |||||||||| ||||| ||| Sbjct 829 GTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTC 888 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || || || || |||| || || || |||||||||||| Sbjct 889 GAGAAGAAGGTGGGCGAGTACCAGAAGGCGGGCGTGATGAGC 930 >seq1335 Length=2956 Score = 246 bits (272), Expect = 3e-60 Identities = 520/762 (68%), Gaps = 18/762 (2%) Strand=Plus/Minus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || |||||| | ||||| ||||||| ||| || || || | |||||| | Sbjct 2779 TTCATCAAGCACGTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTC 2720 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| |||||||| | || ||||| || | Sbjct 2719 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCC 2662 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| ||| | || | || |||||| | | Sbjct 2661 AGTTGATGATGGAGAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCA 2602 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 ||||| || ||||| | | ||| | |||||||| | || || |||| | ||| Sbjct 2601 CGGACAGCGCGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGAT-CCCGTGCATCCAG 2543 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| |||| | || | ||| ||| || Sbjct 2542 AAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGCAGCGGCGCGAGCT--TTCAG-GAGCGG 2486 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATT 58033 || |||| || ||||| || ||||| || ||||| ||||| || |||| | | || Sbjct 2485 CTGATCGGCTTTGCCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCG-CGCTGTT 2427 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| ||| ||||||| ||||||||| |||| ||||| Sbjct 2426 CTGGCTGAAGAAGCGCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCG 2367 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 ||||||||| || || || || || |||||||| ||| |||| ||||| | || Sbjct 2366 CGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAA 2307 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| || ||| || ||||| ||||| |||||| Sbjct 2306 GCTGCCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTT 2247 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | || ||| || || |||||| || |||| |||||| || ||||||| |||| Sbjct 2246 TATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCGCAGTA 2187 Query 58271 CATTGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | |||||| || |||||| Sbjct 2186 CATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGA--AGCACTACAAC 2129 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 || | || || || || ||| | |||||||||| |||||||||| ||||| ||| Sbjct 2128 GTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTC 2069 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || || || || |||| || || || |||||||||||| Sbjct 2068 GAGAAGAAGGTGGGCGAGTACCAGAAGGCGGGCGTGATGAGC 2027 >seq1327 Length=1320 Score = 246 bits (272), Expect = 3e-60 Identities = 520/762 (68%), Gaps = 18/762 (2%) Strand=Plus/Plus Query 57678 TTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTG 57737 || || || |||||| | ||||| ||||||| ||| || || || | |||||| | Sbjct 525 TTCATCAAGCACGTGCTTGCGTTCTTCGCCGGCAGCGACGGGATCGTGATCGAGAACCTC 584 Query 57738 GTCGAAAGATTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTC 57795 | || | | |||| || | ||| | ||| |||||||| | || ||||| || | Sbjct 585 G-CGCA-GCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGCTTCC 642 Query 57796 AAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGA 57855 | || || || ||| | || || || | ||| ||| | || | || |||||| | | Sbjct 643 AGTTGATGATGGAGAACATTCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCA 702 Query 57856 AGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCC 57914 ||||| || ||||| | | ||| | |||||||| | || || |||| | ||| Sbjct 703 CGGACAGCGCGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGAT-CCCGTGCATCCAG 761 Query 57915 AAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGG 57974 |||||||| |||||| | | ||||| |||| | || | ||| ||| || Sbjct 762 AAGAAGGCGGAGTGGGCGGTGCGGTGGATCGGCAGCGGCGCGAGCT--TTCAG-GAGCGG 818 Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TGCGGCAATATT 58033 || |||| || ||||| || ||||| || ||||| ||||| || |||| | | || Sbjct 819 CTGATCGGCTTTGCCGCGGTGGAAGGCATCTTCTTCTCGGGGTCGTTCTGCG-CGCTGTT 877 Query 58034 TTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCG 58093 ||| ||||||| ||||| |||||||| ||| ||||||| ||||||||| |||| ||||| Sbjct 878 CTGGCTGAAGAAGCGCGGGCTGATGCCGGGCTTGACGTTCAGCAACGAGCTGATCTCGCG 937 Query 58094 CGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCACATTGTCAATAA 58150 ||||||||| || || || || || |||||||| ||| |||| ||||| | || Sbjct 938 CGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAA 997 Query 58151 ACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTT 58210 | | |||| || ||| | |||| || ||| || ||||| ||||| |||||| Sbjct 998 GCTGCCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGTGAGTT 1057 Query 58211 TGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTA 58270 | || ||| || || |||||| || |||| |||||| || ||||||| |||| Sbjct 1058 TATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCGCAGTA 1117 Query 58271 CATTGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGTCATTACAAC 58328 ||| ||||| || || ||| | || || ||| | |||||| || |||||| Sbjct 1118 CATCGAGTTCGTCGCGGACCGGCTGCTTGTGTCGCTGGGGCTGGAGA--AGCACTACAAC 1175 Query 58329 ACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTC 58388 || | || || || || ||| | |||||||||| |||||||||| ||||| ||| Sbjct 1176 GTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTC 1235 Query 58389 GaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || || || || |||| || || || |||||||||||| Sbjct 1236 GAGAAGAAGGTGGGCGAGTACCAGAAGGCGGGCGTGATGAGC 1277 >seq5082 Length=27471 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| ||||| |||||| | | || || || || Sbjct 27471 CATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAG 27412 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || ||||||||| ||| | ||||| ||||| Sbjct 27411 CGACACGATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCA 27352 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||| ||||| ||| |||| || Sbjct 27351 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGA 27316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445732655483520