Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq5082 122 9e-23 >seq5082 Length=27471 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||| | |||| ||| |||||| || || ||||| || || || || || | Sbjct 27256 CGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCC 27315 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| || ||||| || || ||||||||||| | || | || ||||||| Sbjct 27316 TCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTG 27375 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| ||| || || | || | | ||||||||||| ||||| || | || ||| Sbjct 27376 TCCTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTCGCCTCCACCTCCAGCGCGATC 27435 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || |||||||| || ||||| ||||| Sbjct 27436 GTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 27470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543171678791040