Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq5764 156 7e-33 seq2242 156 7e-33 seq1335 156 7e-33 seq1327 156 7e-33 >seq5764 Length=2049 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Minus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 1976 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 1917 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 1916 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 1857 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 1856 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 1798 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 1797 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 1738 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 1737 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 1678 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 1677 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 1618 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 1617 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 1559 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 1558 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 1502 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 1501 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 1442 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 1441 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 1382 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 1381 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 1322 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 1321 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 1262 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 1261 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCGTTGCCC 1205 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 1204 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 1148 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 1147 ATGTCGTG 1140 >seq2242 Length=2422 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Minus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 900 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 841 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 840 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 781 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 780 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 722 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 721 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 662 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 661 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 602 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 601 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 542 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 541 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 483 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 482 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 426 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 425 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 366 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 365 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 306 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 305 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 246 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 245 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 186 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 185 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCGTTGCCC 129 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 128 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 72 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 71 ATGTCGTG 64 >seq1335 Length=2956 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Plus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 2057 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 2116 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 2117 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 2176 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 2177 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 2235 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 2236 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 2295 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 2296 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 2355 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 2356 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 2415 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 2416 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 2474 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 2475 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 2531 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 2532 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 2591 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 2592 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 2651 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 2652 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 2711 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 2712 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 2771 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 2772 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCGTTGCCC 2828 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 2829 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 2885 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 2886 ATGTCGTG 2893 >seq1327 Length=1320 Score = 156 bits (172), Expect = 7e-33 Identities = 551/848 (65%), Gaps = 16/848 (2%) Strand=Plus/Minus Query 159643 CACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAA 159702 ||| ||||||||||| ||||| |||||||||| || || || |||||||| |||| Sbjct 1247 CACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA 1188 Query 159703 TGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCAC 159762 || | | |||||| ||| ||||| | || || | | | |||| || ||| || || Sbjct 1187 GGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGAC 1128 Query 159763 AAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCG 159821 || |||||||| || | ||||| |||| ||| || || | ||||| || || |||| Sbjct 1127 GAACTCGATGTA-CTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCG 1069 Query 159822 CTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTT 159881 | || | | |||||| ||| || | ||||| || | |||| | || || | Sbjct 1068 CGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCT 1009 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 || | | ||||| | ||||| || |||| |||||||| ||||| ||||| Sbjct 1008 CGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGTGTGCA 949 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 | |||||||| || ||||| | ||||||| | | | ||||||||| | ||| ||| Sbjct 948 GGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCT 889 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTA-AAAAAGATCCCCTCCACGGCCGCA 160060 || ||||| || | | |||| || ||| | | || ||||| || ||||| || ||| Sbjct 888 TCTTCAGCCAGAACA-GCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCA 830 Query 160061 AACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCAT 160120 || | | |||| ||| ||| ||| | || | | |||||| ||||| Sbjct 829 AAGCCGATCAGCCGCTCCTGAAAGCTCGCGCCGCTGCC---GATCCACCGCACCGCCCAC 773 Query 160121 TCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCC 160180 || |||||||| ||||||||| || || || |||| | || | || |||| Sbjct 772 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 713 Query 160181 TTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 ||| |||| || | | |||| ||||||| | || | ||| | || || Sbjct 712 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 653 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 || || ||| ||| |||||| ||||||| | || ||| || |||| Sbjct 652 ATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCACGTCGCTCATGAAG 593 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 | || | || || | | || | ||||||| | | || ||||| || | |||||| Sbjct 592 CGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGAACGCAAGCACGTGC 533 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 |||||| || | ||| | | ||| || ||| ||||||| ||| ||| | | || Sbjct 532 TTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTC---TCCCAGTCCTTCATGTCGTTGCCC 476 Query 160421 AAATCAACCTCTTCC-GCGCTCCAATTGGCAGCCTGAGCAGTT--TTGTACATGGCCCAG 160477 | || | ||| ||| ||| |||| | |||| || | | | |||||| || |||| Sbjct 475 AGGTCGATCTCCTCCAGCG-TCCAGAT-GCAG-CTCTCCTGCTCCTTGTACTTGCGCCAG 419 Query 160478 ATGGCGTG 160485 ||| |||| Sbjct 418 ATGTCGTG 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795095006751360