Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq5764 334 8e-87 seq2242 334 8e-87 seq1335 334 8e-87 seq1327 334 8e-87 seq5082 125 7e-24 >seq5764 Length=2049 Score = 334 bits (370), Expect = 8e-87 Identities = 583/831 (70%), Gaps = 18/831 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || ||||||||||| ||||| || || || || || |||| Sbjct 2003 CATCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTG 1944 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | | ||| || || ||||| | | |||||||||||| | | | Sbjct 1943 CAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTC-TCCAGCC 1885 Query 132711 C-AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAA 132768 | || || ||||||| ||| || |||||||||||||| |||||||| | | ||| Sbjct 1884 CCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGT 1825 Query 132769 TTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | | || | ||| |||||||||||||| ||| || ||| |||||||| ||| Sbjct 1824 TCATG-CCGATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACC 1766 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC---TT 132884 ||||| || ||| ||| |||||| | |||| | || ||| | ||| || Sbjct 1765 GCGTCCACGATGATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGAGTT 1707 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 | ||| || ||| || ||||| |||| ||||||||| | || || || |||||||| Sbjct 1706 GTACAGCAGGCACGCGAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCT 1647 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| || ||||| || || ||||| || | ||| ||| || Sbjct 1646 GAACGTCAAGCCCGGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 1587 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACG-TGGCT 133062 ||| ||||||| ||| || || || || |||||| | ||| ||||| | ||| | | || Sbjct 1586 CGAGAAGAAGATGCCTTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAGCTCGCG 1529 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| ||||||| |||| |||||| || ||||| | | || |||||| ||||| Sbjct 1528 CC---GCTGCCGATCCACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTC 1472 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAG 133181 | ||| |||| || || || || ||||| | | | || | ||| ||||| | || Sbjct 1471 TGGATCGCGTGCAGCAGCCGCAGCTTCTCCGC-GCTGTCCGTGATGTACGTGTCCAGCAG 1413 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 ||| ||| | |||||||| | ||||||||| | || |||||||| || || Sbjct 1412 CACCGAGTACGTCTCCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCG 1353 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 |||||| ||||| ||| || ||| |||| | || || ||| | ||||| || Sbjct 1352 CGCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCC 1293 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||||||| ||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct 1292 GTCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAG 1233 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | ||||||||| | |||| ||| |||||| | |||||| | ||||| Sbjct 1232 CCTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCA 1182 >seq2242 Length=2422 Score = 334 bits (370), Expect = 8e-87 Identities = 583/831 (70%), Gaps = 18/831 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || ||||||||||| ||||| || || || || || |||| Sbjct 927 CATCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTG 868 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | | ||| || || ||||| | | |||||||||||| | | | Sbjct 867 CAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTC-TCCAGCC 809 Query 132711 C-AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAA 132768 | || || ||||||| ||| || |||||||||||||| |||||||| | | ||| Sbjct 808 CCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGT 749 Query 132769 TTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | | || | ||| |||||||||||||| ||| || ||| |||||||| ||| Sbjct 748 TCATG-CCGATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACC 690 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC---TT 132884 ||||| || ||| ||| |||||| | |||| | || ||| | ||| || Sbjct 689 GCGTCCACGATGATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGAGTT 631 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 | ||| || ||| || ||||| |||| ||||||||| | || || || |||||||| Sbjct 630 GTACAGCAGGCACGCGAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCT 571 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| || ||||| || || ||||| || | ||| ||| || Sbjct 570 GAACGTCAAGCCCGGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 511 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACG-TGGCT 133062 ||| ||||||| ||| || || || || |||||| | ||| ||||| | ||| | | || Sbjct 510 CGAGAAGAAGATGCCTTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAGCTCGCG 453 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| ||||||| |||| |||||| || ||||| | | || |||||| ||||| Sbjct 452 CC---GCTGCCGATCCACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTC 396 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAG 133181 | ||| |||| || || || || ||||| | | | || | ||| ||||| | || Sbjct 395 TGGATCGCGTGCAGCAGCCGCAGCTTCTCCGC-GCTGTCCGTGATGTACGTGTCCAGCAG 337 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 ||| ||| | |||||||| | ||||||||| | || |||||||| || || Sbjct 336 CACCGAGTACGTCTCCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCG 277 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 |||||| ||||| ||| || ||| |||| | || || ||| | ||||| || Sbjct 276 CGCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCC 217 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||||||| ||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct 216 GTCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAG 157 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | ||||||||| | |||| ||| |||||| | |||||| | ||||| Sbjct 156 CCTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCA 106 >seq1335 Length=2956 Score = 334 bits (370), Expect = 8e-87 Identities = 583/831 (70%), Gaps = 18/831 (2%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || ||||||||||| ||||| || || || || || |||| Sbjct 2030 CATCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTG 2089 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | | ||| || || ||||| | | |||||||||||| | | | Sbjct 2090 CAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTC-TCCAGCC 2148 Query 132711 C-AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAA 132768 | || || ||||||| ||| || |||||||||||||| |||||||| | | ||| Sbjct 2149 CCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGT 2208 Query 132769 TTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | | || | ||| |||||||||||||| ||| || ||| |||||||| ||| Sbjct 2209 TCATG-CCGATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACC 2267 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC---TT 132884 ||||| || ||| ||| |||||| | |||| | || ||| | ||| || Sbjct 2268 GCGTCCACGATGATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGAGTT 2326 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 | ||| || ||| || ||||| |||| ||||||||| | || || || |||||||| Sbjct 2327 GTACAGCAGGCACGCGAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCT 2386 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| || ||||| || || ||||| || | ||| ||| || Sbjct 2387 GAACGTCAAGCCCGGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 2446 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACG-TGGCT 133062 ||| ||||||| ||| || || || || |||||| | ||| ||||| | ||| | | || Sbjct 2447 CGAGAAGAAGATGCCTTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAGCTCGCG 2504 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| ||||||| |||| |||||| || ||||| | | || |||||| ||||| Sbjct 2505 CC---GCTGCCGATCCACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTC 2561 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAG 133181 | ||| |||| || || || || ||||| | | | || | ||| ||||| | || Sbjct 2562 TGGATCGCGTGCAGCAGCCGCAGCTTCTCCGC-GCTGTCCGTGATGTACGTGTCCAGCAG 2620 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 ||| ||| | |||||||| | ||||||||| | || |||||||| || || Sbjct 2621 CACCGAGTACGTCTCCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCG 2680 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 |||||| ||||| ||| || ||| |||| | || || ||| | ||||| || Sbjct 2681 CGCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCC 2740 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||||||| ||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct 2741 GTCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAG 2800 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | ||||||||| | |||| ||| |||||| | |||||| | ||||| Sbjct 2801 CCTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCA 2851 >seq1327 Length=1320 Score = 334 bits (370), Expect = 8e-87 Identities = 583/831 (70%), Gaps = 18/831 (2%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || ||||||||||| ||||| || || || || || |||| Sbjct 1274 CATCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTG 1215 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | | ||| || || ||||| | | |||||||||||| | | | Sbjct 1214 CAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTC-TCCAGCC 1156 Query 132711 C-AGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAA 132768 | || || ||||||| ||| || |||||||||||||| |||||||| | | ||| Sbjct 1155 CCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGT 1096 Query 132769 TTAAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACC 132828 | | | || | ||| |||||||||||||| ||| || ||| |||||||| ||| Sbjct 1095 TCATG-CCGATCAGCCGCACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACC 1037 Query 132829 GCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCACCAAATGC---TT 132884 ||||| || ||| ||| |||||| | |||| | || ||| | ||| || Sbjct 1036 GCGTCCACGATGATCTCCAGCACGCGCTC-GCGCGGCAGCTTGTGCTTGATGTGCGAGTT 978 Query 132885 GAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCT 132944 | ||| || ||| || ||||| |||| ||||||||| | || || || |||||||| Sbjct 977 GTACAGCAGGCACGCGAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCT 918 Query 132945 GAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCC 133004 ||| |||||||| ||||| || ||||| || || ||||| || | ||| ||| || Sbjct 917 GAACGTCAAGCCCGGCATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCC 858 Query 133005 CGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCC-ACCAGGCGCTCGCCGAACG-TGGCT 133062 ||| ||||||| ||| || || || || |||||| | ||| ||||| | ||| | | || Sbjct 857 CGAGAAGAAGATGCCTTCCACCGCGGC-AAAGCCGATCAGCCGCTC-CTGAAAGCTCGCG 800 Query 133063 TCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTT 133122 | |||| ||||||| |||| |||||| || ||||| | | || |||||| ||||| Sbjct 799 CC---GCTGCCGATCCACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTC 743 Query 133123 TCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAG 133181 | ||| |||| || || || || ||||| | | | || | ||| ||||| | || Sbjct 742 TGGATCGCGTGCAGCAGCCGCAGCTTCTCCGC-GCTGTCCGTGATGTACGTGTCCAGCAG 684 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 ||| ||| | |||||||| | ||||||||| | || |||||||| || || Sbjct 683 CACCGAGTACGTCTCCGAGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCG 624 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 |||||| ||||| ||| || ||| |||| | || || ||| | ||||| || Sbjct 623 CGCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCC 564 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||||||| ||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct 563 GTCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAG 504 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 | ||||||||| | |||| ||| |||||| | |||||| | ||||| Sbjct 503 CCTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCA 453 >seq5082 Length=27471 Score = 125 bits (138), Expect = 7e-24 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || ||||| || ||| | | || || ||||| | | Sbjct 27470 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGGCGAGC 27411 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACC 38361 |||| | | |||| | || | || |||| ||||| ||||| || ||||||| ||| Sbjct 27410 GACACGATCGAGAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCGGACC 27353 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| || || | ||| ||||| |||||||| || | ||||| ||| ||||||| Sbjct 27352 AGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCGCGGACTACA 27293 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| ||||| | |||||||| | |||||||| Sbjct 27292 ACATCCAGAAGGAGTCCACGCTGCACCTCGTGCTGCG 27256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500134936919040