Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq4054 295 8e-75 seq3433 295 8e-75 seq1312 295 8e-75 seq6047 199 5e-46 seq5184 161 1e-34 >seq4054 Length=4312 Score = 295 bits (326), Expect = 8e-75 Identities = 840/1285 (65%), Gaps = 17/1285 (1%) Strand=Plus/Minus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 3695 CGTCGAGAAGATCTGGCTCTTCTTCGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 3636 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | || || | ||| || |||||||||| || | ||| Sbjct 3635 CATCACGCCACCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 3576 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | ||| | || || | |||| || || |||| ||| ||| Sbjct 3575 ACCCTC--CGTCTGCTTGCTCTTGCCGCCGGTCAGGATGAACGCCTGCACCGCCGCACCG 3518 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || ||||| || || ||| || | ||| Sbjct 3517 TACGCCACGGCCTCATCAGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCC 3458 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| |||| || | | Sbjct 3457 GACACAAGGCTCTGCACCTTCGGGATACGCGTGGAGCCGCCCACCAGCACGACGTCGTGC 3398 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 3397 ACGGAGCGCTTGTCCATCTTCGCGTCCTGGAGCACGCGCTCCACCGGCTGGATCGTGCTG 3338 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || ||||| || || | | | ||| || Sbjct 3337 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCACGCGTGATCGTGGCCTGGAAGTCC 3278 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || || || | || ||| Sbjct 3277 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCAGACGACAGGGTGCGC 3218 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| ||||| || || | || || || ||||| || | || | || Sbjct 3217 TTCGCACGCTCGCACGCAGTGCGCAGGCGGCGCAGCGCACGGTGGCTCGAAGACAGGTCC 3158 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || |||| ||| | || | ||||| Sbjct 3157 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGCTGAAGAACGTC--ACCAGGCGGTTATCGA 3100 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || ||||| | ||| || || || || || || || || ||||| || || | Sbjct 3099 AGTCCTCGCCACCGAGGTGGGTGTCGCCGTTCGTGGCCTTCACCTCGAAGATGCCGCCGT 3040 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | |||| || ||||| |||||||| ||||| || || || || || ||||| Sbjct 3039 CGATCGTCAACAGCGTCACATCGAACGTACCGCCACCGAGATCGAAGATCAGCACGTTGC 2980 Query 7581 TATCGTCGTCTTTGTT---CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | | | | || ||| || |||||||||||||| || || ||||| || || | Sbjct 2979 GCTCCTTGCCGTCGTCACCCTTGTCCAGACCGTACGCGATGGCGGCAGCCGTCGGCTCGT 2920 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | ||| ||||| || || | ||||| |||||||| || || | Sbjct 2919 TGATGATGCGGAGCACCTCCAGACCAGCGATCGTACCGGCATCCTTCGTCGCCTGACGCT 2860 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| || ||||| || ||||| | | | || | ||| || || | Sbjct 2859 GGGAGTCGTTGAAGTAGGCAGGCACCGTCACCACCGCCTTCTTCACCTGCTTGCCAAGGT 2800 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| ||||| || | || | Sbjct 2799 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGTGA 2740 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 2739 AGGTCTTCTCCTCGCCGTGGAACTGCACCAGGATCACGGGCTTGTCGTCACCCTTCGTCG 2680 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || || || ||| ||||| | | Sbjct 2679 TCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGCACAACGGAGTCGTTGAACTTGCGGC 2620 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || |||||||| || || || ||||| | |||||||| || |||||||||| Sbjct 2619 CAATCAGGCGCTTTGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 2560 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || ||||| ||| | |||| ||||| |||||||| || ||||| | Sbjct 2559 CGGCATCGCCAATCAGACGCTCAGAGT---CCGTGAACGCCACGTACGACGGCGTCGTGC 2503 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || |||||||||||||| || || ||||| ||||| ||||| ||||| ||||||| Sbjct 2502 GGTTACCCTGGTCGTTCGCAATGATCTCAACGCGCTCGTTCTGCCACACGCCAACGCACG 2443 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | ||||||||| Sbjct 2442 AGTACGTCGTACCCAGATCAATACC 2418 >seq3433 Length=5984 Score = 295 bits (326), Expect = 8e-75 Identities = 840/1285 (65%), Gaps = 17/1285 (1%) Strand=Plus/Plus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 618 CGTCGAGAAGATCTGGCTCTTCTTCGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 677 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | || || | ||| || |||||||||| || | ||| Sbjct 678 CATCACGCCACCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 737 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | ||| | || || | |||| || || |||| ||| ||| Sbjct 738 ACCCTC--CGTCTGCTTGCTCTTGCCGCCGGTCAGGATGAACGCCTGCACCGCCGCACCG 795 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || ||||| || || ||| || | ||| Sbjct 796 TACGCCACGGCCTCATCAGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCC 855 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| |||| || | | Sbjct 856 GACACAAGGCTCTGCACCTTCGGGATACGCGTGGAGCCGCCCACCAGCACGACGTCGTGC 915 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 916 ACGGAGCGCTTGTCCATCTTCGCGTCCTGGAGCACGCGCTCCACCGGCTGGATCGTGCTG 975 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || ||||| || || | | | ||| || Sbjct 976 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCACGCGTGATCGTGGCCTGGAAGTCC 1035 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || || || | || ||| Sbjct 1036 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCAGACGACAGGGTGCGC 1095 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| ||||| || || | || || || ||||| || | || | || Sbjct 1096 TTCGCACGCTCGCACGCAGTGCGCAGGCGGCGCAGCGCACGGTGGCTCGAAGACAGGTCC 1155 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || |||| ||| | || | ||||| Sbjct 1156 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGCTGAAGAACGTC--ACCAGGCGGTTATCGA 1213 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || ||||| | ||| || || || || || || || || ||||| || || | Sbjct 1214 AGTCCTCGCCACCGAGGTGGGTGTCGCCGTTCGTGGCCTTCACCTCGAAGATGCCGCCGT 1273 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | |||| || ||||| |||||||| ||||| || || || || || ||||| Sbjct 1274 CGATCGTCAACAGCGTCACATCGAACGTACCGCCACCGAGATCGAAGATCAGCACGTTGC 1333 Query 7581 TATCGTCGTCTTTGTT---CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | | | | || ||| || |||||||||||||| || || ||||| || || | Sbjct 1334 GCTCCTTGCCGTCGTCACCCTTGTCCAGACCGTACGCGATGGCGGCAGCCGTCGGCTCGT 1393 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | ||| ||||| || || | ||||| |||||||| || || | Sbjct 1394 TGATGATGCGGAGCACCTCCAGACCAGCGATCGTACCGGCATCCTTCGTCGCCTGACGCT 1453 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| || ||||| || ||||| | | | || | ||| || || | Sbjct 1454 GGGAGTCGTTGAAGTAGGCAGGCACCGTCACCACCGCCTTCTTCACCTGCTTGCCAAGGT 1513 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| ||||| || | || | Sbjct 1514 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGTGA 1573 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 1574 AGGTCTTCTCCTCGCCGTGGAACTGCACCAGGATCACGGGCTTGTCGTCACCCTTCGTCG 1633 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || || || ||| ||||| | | Sbjct 1634 TCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGCACAACGGAGTCGTTGAACTTGCGGC 1693 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || |||||||| || || || ||||| | |||||||| || |||||||||| Sbjct 1694 CAATCAGGCGCTTTGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 1753 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || ||||| ||| | |||| ||||| |||||||| || ||||| | Sbjct 1754 CGGCATCGCCAATCAGACGCTCAGAGT---CCGTGAACGCCACGTACGACGGCGTCGTGC 1810 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || |||||||||||||| || || ||||| ||||| ||||| ||||| ||||||| Sbjct 1811 GGTTACCCTGGTCGTTCGCAATGATCTCAACGCGCTCGTTCTGCCACACGCCAACGCACG 1870 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | ||||||||| Sbjct 1871 AGTACGTCGTACCCAGATCAATACC 1895 Score = 295 bits (326), Expect = 8e-75 Identities = 840/1285 (65%), Gaps = 17/1285 (1%) Strand=Plus/Plus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 4638 CGTCGAGAAGATCTGGCTCTTCTTCGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 4697 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | || || | ||| || |||||||||| || | ||| Sbjct 4698 CATCACGCCACCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 4757 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | ||| | || || | |||| || || |||| ||| ||| Sbjct 4758 ACCCTC--CGTCTGCTTGCTCTTGCCGCCGGTCAGGATGAACGCCTGCACCGCCGCACCG 4815 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || ||||| || || ||| || | ||| Sbjct 4816 TACGCCACGGCCTCATCAGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCC 4875 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| |||| || | | Sbjct 4876 GACACAAGGCTCTGCACCTTCGGGATACGCGTGGAGCCGCCCACCAGCACGACGTCGTGC 4935 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 4936 ACGGAGCGCTTGTCCATCTTCGCGTCCTGGAGCACGCGCTCCACCGGCTGGATCGTGCTG 4995 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || ||||| || || | | | ||| || Sbjct 4996 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCACGCGTGATCGTGGCCTGGAAGTCC 5055 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || || || | || ||| Sbjct 5056 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCAGACGACAGGGTGCGC 5115 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| ||||| || || | || || || ||||| || | || | || Sbjct 5116 TTCGCACGCTCGCACGCAGTGCGCAGGCGGCGCAGCGCACGGTGGCTCGAAGACAGGTCC 5175 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || |||| ||| | || | ||||| Sbjct 5176 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGCTGAAGAACGTC--ACCAGGCGGTTATCGA 5233 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || ||||| | ||| || || || || || || || || ||||| || || | Sbjct 5234 AGTCCTCGCCACCGAGGTGGGTGTCGCCGTTCGTGGCCTTCACCTCGAAGATGCCGCCGT 5293 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | |||| || ||||| |||||||| ||||| || || || || || ||||| Sbjct 5294 CGATCGTCAACAGCGTCACATCGAACGTACCGCCACCGAGATCGAAGATCAGCACGTTGC 5353 Query 7581 TATCGTCGTCTTTGTT---CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | | | | || ||| || |||||||||||||| || || ||||| || || | Sbjct 5354 GCTCCTTGCCGTCGTCACCCTTGTCCAGACCGTACGCGATGGCGGCAGCCGTCGGCTCGT 5413 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | ||| ||||| || || | ||||| |||||||| || || | Sbjct 5414 TGATGATGCGGAGCACCTCCAGACCAGCGATCGTACCGGCATCCTTCGTCGCCTGACGCT 5473 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| || ||||| || ||||| | | | || | ||| || || | Sbjct 5474 GGGAGTCGTTGAAGTAGGCAGGCACCGTCACCACCGCCTTCTTCACCTGCTTGCCAAGGT 5533 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| ||||| || | || | Sbjct 5534 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGTGA 5593 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 5594 AGGTCTTCTCCTCGCCGTGGAACTGCACCAGGATCACGGGCTTGTCGTCACCCTTCGTCG 5653 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || || || ||| ||||| | | Sbjct 5654 TCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGCACAACGGAGTCGTTGAACTTGCGGC 5713 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || |||||||| || || || ||||| | |||||||| || |||||||||| Sbjct 5714 CAATCAGGCGCTTTGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 5773 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || ||||| ||| | |||| ||||| |||||||| || ||||| | Sbjct 5774 CGGCATCGCCAATCAGACGCTCAGAGT---CCGTGAACGCCACGTACGACGGCGTCGTGC 5830 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || |||||||||||||| || || ||||| ||||| ||||| ||||| ||||||| Sbjct 5831 GGTTACCCTGGTCGTTCGCAATGATCTCAACGCGCTCGTTCTGCCACACGCCAACGCACG 5890 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | ||||||||| Sbjct 5891 AGTACGTCGTACCCAGATCAATACC 5915 >seq1312 Length=8115 Score = 295 bits (326), Expect = 8e-75 Identities = 840/1285 (65%), Gaps = 17/1285 (1%) Strand=Plus/Plus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 6769 CGTCGAGAAGATCTGGCTCTTCTTCGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 6828 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | ||||| || || | || || | ||| || |||||||||| || | ||| Sbjct 6829 CATCACGCCACCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 6888 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | ||| | || || | |||| || || |||| ||| ||| Sbjct 6889 ACCCTC--CGTCTGCTTGCTCTTGCCGCCGGTCAGGATGAACGCCTGCACCGCCGCACCG 6946 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || |||||||| ||||| || | || ||||| || || ||| || | ||| Sbjct 6947 TACGCCACGGCCTCATCAGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCC 7006 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | | || | |||||||| || || || || || |||| |||| || | | Sbjct 7007 GACACAAGGCTCTGCACCTTCGGGATACGCGTGGAGCCGCCCACCAGCACGACGTCGTGC 7066 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 7067 ACGGAGCGCTTGTCCATCTTCGCGTCCTGGAGCACGCGCTCCACCGGCTGGATCGTGCTG 7126 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || ||||| || || | | | ||| || Sbjct 7127 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCACGCGTGATCGTGGCCTGGAAGTCC 7186 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || || || | || ||| Sbjct 7187 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCAGACGACAGGGTGCGC 7246 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || ||||| ||||| || || | || || || ||||| || | || | || Sbjct 7247 TTCGCACGCTCGCACGCAGTGCGCAGGCGGCGCAGCGCACGGTGGCTCGAAGACAGGTCC 7306 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || |||| ||| | || | ||||| Sbjct 7307 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGCTGAAGAACGTC--ACCAGGCGGTTATCGA 7364 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || ||||| | ||| || || || || || || || || ||||| || || | Sbjct 7365 AGTCCTCGCCACCGAGGTGGGTGTCGCCGTTCGTGGCCTTCACCTCGAAGATGCCGCCGT 7424 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | |||| || ||||| |||||||| ||||| || || || || || ||||| Sbjct 7425 CGATCGTCAACAGCGTCACATCGAACGTACCGCCACCGAGATCGAAGATCAGCACGTTGC 7484 Query 7581 TATCGTCGTCTTTGTT---CTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | | | | || ||| || |||||||||||||| || || ||||| || || | Sbjct 7485 GCTCCTTGCCGTCGTCACCCTTGTCCAGACCGTACGCGATGGCGGCAGCCGTCGGCTCGT 7544 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | ||| ||||| || || | ||||| |||||||| || || | Sbjct 7545 TGATGATGCGGAGCACCTCCAGACCAGCGATCGTACCGGCATCCTTCGTCGCCTGACGCT 7604 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 | || ||||| |||||||| || ||||| || ||||| | | | || | ||| || || | Sbjct 7605 GGGAGTCGTTGAAGTAGGCAGGCACCGTCACCACCGCCTTCTTCACCTGCTTGCCAAGGT 7664 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| ||||| || | || | Sbjct 7665 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTGATCTCCTCCGGCGTGA 7724 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 7725 AGGTCTTCTCCTCGCCGTGGAACTGCACCAGGATCACGGGCTTGTCGTCACCCTTCGTCG 7784 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || || || ||| ||||| | | Sbjct 7785 TCACCTTGAAGGGCCAGTGCTTCATGTCCGACTGCACAACGGAGTCGTTGAACTTGCGGC 7844 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || |||||||| || || || ||||| | |||||||| || |||||||||| Sbjct 7845 CAATCAGGCGCTTTGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 7904 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || || || ||||| ||| | |||| ||||| |||||||| || ||||| | Sbjct 7905 CGGCATCGCCAATCAGACGCTCAGAGT---CCGTGAACGCCACGTACGACGGCGTCGTGC 7961 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || |||||||||||||| || || ||||| ||||| ||||| ||||| ||||||| Sbjct 7962 GGTTACCCTGGTCGTTCGCAATGATCTCAACGCGCTCGTTCTGCCACACGCCAACGCACG 8021 Query 8118 AATACGTTGTTCCTAAATCAATACC 8142 | ||||| || || | ||||||||| Sbjct 8022 AGTACGTCGTACCCAGATCAATACC 8046 >seq6047 Length=14507 Score = 199 bits (220), Expect = 5e-46 Identities = 465/698 (67%), Gaps = 15/698 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||| | || || || || || || || || || || || | || Sbjct 12115 TCGAAGTCCTCGCCACCAAGATGGGTGTCACCGGCCGTTGCCTTCACCTCGAACACGCCA 12056 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || || ||||| |||||||| ||||| || || || || || || Sbjct 12055 CTCTCGATCGTCAGCAGCGTTACATCGAACGTACCGCCACCGAGATCGAAGATCAGCACA 11996 Query 7577 TTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | ||| | | | |||||| || | ||||| |||||||| || ||||| || Sbjct 11995 TTCTTCTCGCCCTTGTCGTTCTTGCGGTCCATGCCGTAGGCGATAGCGGCGGCCGTCGGC 11936 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| || || ||||| | | || || || ||||| || Sbjct 11935 TCGTTGATGATGCGCAGCACGTTAAGTCCTGCAATGGAGCCGGCGTCCTTAGTCGCCTGA 11876 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || || ||||| ||||| ||||| || || ||||| |||||| | || | |||| Sbjct 11875 CGCTGGGAGTCGTTGAAGTAAGCCGGCACGGTCACGACGGCGTCCTTCACAGGCGCACCG 11816 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || |||| || || | || ||||| || || ||||||| || ||||| |||| Sbjct 11815 AGGTACGCCTCGGCCGTCTCCTTCATCTTCTGCAGCACCATCGCGGAGATCTCCTCAGGG 11756 Query 7814 GCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT---ATCCGCAGCA 7870 || ||| || ||| | |||| || || | ||| || |||| || Sbjct 11755 AAGAAGGTTTTGGTGGAACCCTGGTAATCCACAGTGATGACGGGCTTGCCATCCTT--CA 11698 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 | | | |||||| | | ||| | ||||| ||| || | | | || ||| Sbjct 11697 CGGTG----ACCTTAAAGGGCCAGTGCTTCATGTCGGACTGCAGATCGGGATCGTCGAAC 11642 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | || || | ||||| ||||| ||||| ||||| | |||||||| || ||| Sbjct 11641 TTGCGGCCAATCATGCGCTTCGCATCGAAAACGGTGTTGTGCGGGTTCATCGCCACCTGG 11582 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 |||||||| || || |||| || || || | | | || ||||| |||||||| || Sbjct 11581 TTCTTCGCGGCATCGCCGACGAGGCGCTCCGTCT---CGGTGAACGCTACGTACGACGGC 11525 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 || || || || || ||||| || || || || || || | ||||| | |||| ||| Sbjct 11524 GTTGTGCGGTTACCCTGGTCATTTGCGATGATCTCCACCTGATCGTTCTTGAAGACACCG 11465 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 |||||||| ||||| || || | ||||||||| || || Sbjct 11464 ACGCACGAGTACGTCGTGCCAAGATCAATACCAATGGC 11427 >seq5184 Length=7934 Score = 161 bits (178), Expect = 1e-34 Identities = 240/341 (70%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||| || |||||||| | ||| || || || ||||| || ||||| | || Sbjct 5205 ATCGAAGTCCTCACCACCGAGGTGGGTGTCACCGTTTGTCGCCACCACCTCAAAAAAGCC 5264 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || || | | || ||| ||||||||||| |||||||||| |||||| | ||| | Sbjct 5265 CTCATCGATCGTCAGCAGCGACACATCAAACGTGCCACCACCCAAGTCAAAGACGAGGAT 5324 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | || | | |||||| || ||||||||||| || || || || || || Sbjct 5325 GTTCTTTTCACCTGCCTTGTTC------AGGCCGTACGCGATGGCGGCAGCTGTCGGCTC 5378 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | | ||| || |||||||| | | || || |||||||| || || Sbjct 5379 GTTGATGATGCGCACAACGTTGAGCCCAGCAATCTTCCCGGCGTCCTTCGTCGCCTGACG 5438 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 ||| | |||||| ||||||||||| || || || || |||| | | ||||||| ||| || Sbjct 5439 TTGAGCATCGTTGAAGTAGGCCGGCACGGTCACCACGGCGTTCTTCACTTTCTCACCAAG 5498 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 ||| || | ||| || ||||| || || ||||||| Sbjct 5499 GAACGTCTCGGAGATGTCCTTCATCTTCTGCAGCACCATCG 5539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635084720447040