Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq1464 138 2e-27 >seq1464 Length=25142 Score = 138 bits (152), Expect = 2e-27 Identities = 278/398 (70%), Gaps = 21/398 (5%) Strand=Plus/Minus Query 168645 ACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGAA---CGCCGGCACGAAC 168701 |||||||||||||| |||||||| ||| ||| ||| |||| ||||| | | || Sbjct 17273 ACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGCAATGTAC 17214 Query 168702 TCCCGGATCGCCTTGAGCACGCGGA-CCATCATCATGTCGCGGTTCAGGCGCGCGAAGTC 168760 ||||| |||| || | ||| || | ||| ||||| | |||||| | || || Sbjct 17213 TCCCGCATCGTCTCCACCAC-CGCATCCAGCATCACCTGCCGGTTCCACCAGGCAAACCG 17155 Query 168761 TTGCGCCCAGCCCACGGCTTCGATGTAGTCGTCGAAATCCTGCTCGCCCACTTCG-AGCC 168819 |||||||| ||||||| ||||||||||| ||| | |||| || || || Sbjct 17154 CTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTG-TGCTGTACCCTCGCGCAGAT 17096 Query 168820 ACGCGAGGTTCTCGTCCTGCGGGCG-CACA-TGGCGCTTTGCC-AGGGCGTTCTTCGCCT 168876 |||| || | ||||||| || |||| | || | | || ||| | | | ||||| ||| Sbjct 17095 ACGCCAGATCCTCGTCCGGCAGGCGACTCAGTTGTGC---GCCGACGTCTTTCTTGGCCA 17039 Query 168877 TCTCGATGAAGTAGTTGCCGATCACGTTGCCGACGCCGCGCGATCCCGAGTGCAGCATCA 168936 |||||||||| | |||| || |||||| || |||||||| || || || ||||||| Sbjct 17038 GCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATGGAGCATCA 16979 Query 168937 CCCACACGTTCGGGTCC-GTCGTCCCCTGATCGGTCTGGATGCAGATTTCGATGAAGTGG 168995 ||||||| | ||| || || || ||||| || || ||||| |||||||||||| Sbjct 16978 CCCACACATGCGGCACCGGTTGT----TGATC-ATCCAGA--CAGATCTCGATGAAGTGG 16926 Query 168996 TTGCCGCCACCCAGCGACCCGAGTTGGGTCACGTTGTT 169033 ||||| ||||| | ||||| ||| | | || ||| Sbjct 16925 TTGCCAGTGCCCAGGGTGCCGAGGTGGTTGAGGTGGTT 16888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895698590483520