Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq1464 127 3e-24 >seq1464 Length=25142 Score = 127 bits (140), Expect = 3e-24 Identities = 264/391 (68%), Gaps = 24/391 (6%) Strand=Plus/Minus Query 135773 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 135832 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 17280 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 17221 Query 135833 GCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 135892 || ||||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 17220 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 17161 Query 135893 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGTTCGCCTTCGCA 135952 || ||| |||| | ||||| | |||||||| ||||| | | || |||| Sbjct 17160 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 17101 Query 135953 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCA------CGCCGCAGCATCAT 136006 || | || || |||| |||| || | ||| | ||| ||||| | | Sbjct 17100 CAGATACGCCAGATCCTCGTCCGGCAG---GCGAC--TCAGTTGTGCGCCGACGTCT--- 17049 Query 136007 CTCCTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGA 136066 | ||||||| |||||||||||| ||| || |||||| || ||||||||||| || Sbjct 17048 -TTCTTGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGA 16990 Query 136067 GTGGAGCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAA 136117 |||||||||||||| || || | || | || || || |||| ||||||||| Sbjct 16989 ATGGAGCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAA 16930 Query 136118 GTGGTTGCCGCCGCCCAGGGTGCCCAGTTGG 136148 ||||||||| |||||||||||| || ||| Sbjct 16929 GTGGTTGCCAGTGCCCAGGGTGCCGAGGTGG 16899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700391776328640