Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq1464 104 3e-17 >seq1464 Length=25142 Score = 104 bits (114), Expect = 3e-17 Identities = 261/388 (67%), Gaps = 18/388 (5%) Strand=Plus/Minus Query 139748 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAAGGGCGGCAG 139807 ||||| ||||||||||||||||||||||| ||| ||| || ||||||||| | Sbjct 17280 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 17221 Query 139808 GCCCGAGGCGCGCATGGCGTCCAGGACCCGGATC-ATCATCATCTCGCGGTTGATCCGCG 139866 | | ||||| | |||| ||| | ||| | ||||| || ||||| || | Sbjct 17220 AATGTACTCCCGCATCGTCTCCACCACC-GCATCCAGCATCACCTGCCGGTTCCACCAGG 17162 Query 139867 CGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTCCGGCTCGCCTTCCG 139926 | || ||| |||| | ||||| | |||||||| ||| | | || || Sbjct 17161 CAAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGC 17102 Query 139927 ACAGCCACGCGAGGTCCTTGTCGAGC-GGCTTCTGACCGTCCCGACGCAGCATCATCTC- 139984 ||| |||| || |||| ||| || ||| || | || | ||| | | ||| Sbjct 17101 GCAGATACGCCAGATCCTCGTCCGGCAGGCGACTCA--GTTGTG-CGCCGA--CGTCTTT 17047 Query 139985 CTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTG 140044 ||||||| |||||||||||| ||| || |||||| || ||||||||||| || || Sbjct 17046 CTTGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATG 16987 Query 140045 GAGCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTG 140095 |||||||||||| || || | || | || || || |||| |||||||||||| Sbjct 16986 GAGCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAAGTG 16927 Query 140096 GTTGCCGCCGCCCAGCGTGCCCAGTTGG 140123 |||||| |||||| ||||| || ||| Sbjct 16926 GTTGCCAGTGCCCAGGGTGCCGAGGTGG 16899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715721815756800